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  5. Sopen05g015600

Sopen05g015600


Description : ABC-2 type transporter


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g015600
Cluster HCCA clusters: Cluster_374

Target Alias Description ECC score Gene Family Method Actions
441722 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
A4A49_31699 No alias pleiotropic drug resistance protein 2 0.03 Orthogroups_2024-Update
Bradi4g28270 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
GRMZM2G451792 No alias pleiotropic drug resistance 7 0.03 Orthogroups_2024-Update
Glyma.17G120100 No alias pleiotropic drug resistance 4 0.02 Orthogroups_2024-Update
Glyma.17G206300 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Glyma.18G063400 No alias pleiotropic drug resistance 3 0.02 Orthogroups_2024-Update
HORVU3Hr1G071470.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
LOC_Os01g42380 No alias pleiotropic drug resistance protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g16458 No alias pleiotropic drug resistance protein 4, putative, expressed 0.02 Orthogroups_2024-Update
MA_10426781g0010 No alias (at2g36380 : 1292.0) pleiotropic drug resistance 6... 0.03 Orthogroups_2024-Update
PSME_00000867-RA No alias (q8gu92|pdr2_orysa : 1758.0) Probable pleiotropic drug... 0.03 Orthogroups_2024-Update
PSME_00007073-RA No alias (q8gu88|pdr7_orysa : 1875.0) Putative pleiotropic drug... 0.03 Orthogroups_2024-Update
PSME_00008988-RA No alias (q5z9s8|pdr12_orysa : 1221.0) Pleiotropic drug... 0.03 Orthogroups_2024-Update
Potri.001G251100 No alias pleiotropic drug resistance 3 0.04 Orthogroups_2024-Update
Potri.009G147100 No alias pleiotropic drug resistance 6 0.03 Orthogroups_2024-Update
Pp1s36_257V6 No alias atp-binding cassette 0.02 Orthogroups_2024-Update
Pp1s46_257V6 No alias atp-binding cassette 0.03 Orthogroups_2024-Update
Seita.4G181500.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Seita.5G125600.1 No alias cuticular lipid exporter *(PEC1) & subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Seita.5G221300.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013581 PDR_assoc 705 769
IPR003439 ABC_transporter-like 849 999
IPR003439 ABC_transporter-like 152 334
IPR029481 ABC_trans_N 64 127
IPR013525 ABC_2_trans 490 700
IPR013525 ABC_2_trans 1145 1358
No external refs found!