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  5. PSME_00000038-RA

PSME_00000038-RA


Description : (at5g60930 : 1050.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G47820.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p46869|fla10_chlre : 255.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 2100.0) & (original description: no original description)


Gene families : OG_42_0001565 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001565_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00000038-RA
Cluster HCCA clusters: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
A4A49_02531 No alias kinesin-like protein kin-4c 0.05 Orthogroups_2024-Update
Cre10.g418950 No alias P-loop containing nucleoside triphosphate hydrolases... 0.01 Orthogroups_2024-Update
Kfl00407_0100 kfl00407_0100_v1.1 (at5g60930 : 708.0) P-loop containing nucleoside... 0.02 Orthogroups_2024-Update
Pp1s80_21V6 No alias chromosome-associated kinesin 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0007018 microtubule-based movement IEA InterProScan predictions
MF GO:0008017 microtubule binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001752 Kinesin_motor_dom 122 449
No external refs found!