1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00000199-RA

PSME_00000199-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000662 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000662_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00000199-RA
Cluster HCCA clusters: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
PSME_00003057-RA No alias (at3g09510 : 81.3) Ribonuclease H-like superfamily... 0.04 Orthogroups_2024-Update
PSME_00005455-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00006016-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00009430-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00011182-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00012027-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00012242-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00021943-RA No alias no hits & (original description: no original description) 0.06 Orthogroups_2024-Update
PSME_00022554-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00031604-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00035328-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00040743-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00055032-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000098 sulfur amino acid catabolic process IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009063 cellular amino acid catabolic process IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
BP GO:0030328 prenylcysteine catabolic process IEP Predicted GO
BP GO:0030329 prenylcysteine metabolic process IEP Predicted GO
BP GO:0042219 cellular modified amino acid catabolic process IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044273 sulfur compound catabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR025558 DUF4283 132 275
IPR026960 RVT-Znf 531 577
No external refs found!