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  5. PSME_00000230-RA

PSME_00000230-RA


Description : (at1g73010 : 248.0) phosphate starvation-induced gene 2 (PS2); FUNCTIONS IN: phosphatase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate phosphatase, PHOSPHO2 (InterPro:IPR016965), HAD-superfamily hydrolase, subfamily IB, PSPase-like (InterPro:IPR006383), Pyridoxal phosphate phosphatase-related (InterPro:IPR006384); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate phosphatase-related protein (TAIR:AT1G17710.1); Has 357 Blast hits to 345 proteins in 104 species: Archae - 0; Bacteria - 14; Metazoa - 174; Fungi - 18; Plants - 106; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (reliability: 496.0) & (original description: no original description)


Gene families : OG_42_0001330 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001330_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00000230-RA
Cluster HCCA clusters: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
MA_10338837g0010 No alias (at1g17710 : 184.0) Pyridoxal phosphate... 0.03 Orthogroups_2024-Update
MA_11734g0010 No alias (at1g73010 : 265.0) phosphate starvation-induced gene 2... 0.02 Orthogroups_2024-Update
MA_9506636g0010 No alias (at1g73010 : 266.0) phosphate starvation-induced gene 2... 0.03 Orthogroups_2024-Update
Seita.1G031100.1 No alias phosphocholine phosphatase & EC_3.1 hydrolase acting on... 0.02 Orthogroups_2024-Update
Seita.5G299700.1 No alias phosphocholine phosphatase & EC_3.1 hydrolase acting on... 0.04 Orthogroups_2024-Update
Sobic.003G209600.2 No alias phosphocholine phosphatase & EC_3.1 hydrolase acting on... 0.03 Orthogroups_2024-Update
evm.model.contig_2095.5 No alias (at4g29530 : 108.0) Pyridoxal phosphate... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016791 phosphatase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR016965 Pase_PHOSPHO-typ 241 475
IPR016965 Pase_PHOSPHO-typ 6 237
No external refs found!