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  5. PSME_00000232-RA

PSME_00000232-RA


Description : (at3g49142 : 404.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G33990.1). & (q76c99|rf1_orysa : 98.2) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 746.0) & (original description: no original description)


Gene families : OG_42_0018773 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00000232-RA
Cluster HCCA clusters: Cluster_210

Target Alias Description ECC score Gene Family Method Actions
MA_892148g0010 No alias (at1g11290 : 456.0) Pentatricopeptide Repeat Protein... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0016567 protein ubiquitination IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 200 248
IPR002885 Pentatricopeptide_repeat 36 68
IPR032867 DYW_dom 373 457
IPR002885 Pentatricopeptide_repeat 174 199
IPR002885 Pentatricopeptide_repeat 101 130
IPR002885 Pentatricopeptide_repeat 73 98
IPR002885 Pentatricopeptide_repeat 274 298
No external refs found!