PSME_00000342-RA

Description : (at1g29280 : 114.0) member of WRKY Transcription Factor; Group II-e; WRKY DNA-binding protein 65 (WRKY65); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 69 (TAIR:AT3G58710.1); Has 3604 Blast hits to 3142 proteins in 247 species: Archae - 4; Bacteria - 64; Metazoa - 46; Fungi - 24; Plants - 3284; Viruses - 4; Other Eukaryotes - 178 (source: NCBI BLink). & (reliability: 228.0) & (original description: no original description)

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00000342-RA
Cluster	HCCA clusters: Cluster_196

Target	Alias	Description	ECC score	Gene Family Method
77979	No alias	WRKY DNA-binding protein 35	0.05	Orthogroups_2024-Update
A4A49_24743	No alias	putative wrky transcription factor 20	0.03	Orthogroups_2024-Update
At2g40740	No alias	WRKY DNA-binding protein 55 [Source:TAIR;Acc:AT2G40740]	0.03	Orthogroups_2024-Update
At4g01250	No alias	WRKY transcription factor 22...	0.04	Orthogroups_2024-Update
At4g18170	No alias	WRKY28 [Source:UniProtKB/TrEMBL;Acc:A0A178V3M3]	0.03	Orthogroups_2024-Update
Bradi1g01058	No alias	WRKY DNA-binding protein 35	0.03	Orthogroups_2024-Update
Bradi1g02327	No alias	WRKY family transcription factor family protein	0.03	Orthogroups_2024-Update
Bradi1g08106	No alias	WRKY DNA-binding protein 57	0.02	Orthogroups_2024-Update
Bradi2g08620	No alias	WRKY family transcription factor	0.05	Orthogroups_2024-Update
Bradi2g33540	No alias	WRKY DNA-binding protein 50	0.02	Orthogroups_2024-Update
Bradi2g49020	No alias	WRKY DNA-binding protein 24	0.04	Orthogroups_2024-Update
Bradi2g49906	No alias	WRKY DNA-binding protein 65	0.02	Orthogroups_2024-Update
Bradi3g06070	No alias	WRKY DNA-binding protein 40	0.03	Orthogroups_2024-Update
Bradi3g09810	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Bradi4g28280	No alias	WRKY DNA-binding protein 46	0.02	Orthogroups_2024-Update
Bradi4g30372	No alias	WRKY DNA-binding protein 18	0.03	Orthogroups_2024-Update
Bradi5g17395	No alias	WRKY family transcription factor	0.05	Orthogroups_2024-Update
Brara.C01262.1	No alias	WRKY-type transcription factor	0.05	Orthogroups_2024-Update
Brara.C02964.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Brara.D02837.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.F02353.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Brara.I04309.1	No alias	WRKY-type transcription factor & component *(MED19) of...	0.04	Orthogroups_2024-Update
GRMZM2G123387	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Glyma.01G043300	No alias	WRKY DNA-binding protein 72	0.03	Orthogroups_2024-Update
Glyma.03G042700	No alias	WRKY DNA-binding protein 33	0.05	Orthogroups_2024-Update
Glyma.04G218400	No alias	WRKY DNA-binding protein 13	0.04	Orthogroups_2024-Update
Glyma.04G223300	No alias	WRKY DNA-binding protein 70	0.03	Orthogroups_2024-Update
Glyma.05G211900	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Glyma.06G168400	No alias	WRKY DNA-binding protein 75	0.02	Orthogroups_2024-Update
Glyma.08G320200	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Glyma.09G254800	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Glyma.18G056600	No alias	WRKY DNA-binding protein 33	0.06	Orthogroups_2024-Update
HORVU0Hr1G012750.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
HORVU1Hr1G090190.6	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
HORVU1Hr1G092130.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
HORVU2Hr1G034420.2	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
HORVU3Hr1G020140.3	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
HORVU3Hr1G020210.2	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
HORVU3Hr1G060500.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
HORVU3Hr1G071750.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
HORVU5Hr1G096420.20	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
HORVU5Hr1G124320.9	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
LOC_Os07g48260	No alias	WRKY47, expressed	0.02	Orthogroups_2024-Update
PSME_00010717-RA	No alias	(at4g22070 : 177.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
PSME_00030013-RA	No alias	(at2g38470 : 151.0) Member of the plant WRKY...	0.03	Orthogroups_2024-Update
PSME_00040311-RA	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
PSME_00049059-RA	No alias	(at1g29860 : 114.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00051212-RA	No alias	(at4g11070 : 110.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
Potri.001G460600	No alias	WRKY DNA-binding protein 14	0.02	Orthogroups_2024-Update
Potri.002G193000	No alias	WRKY DNA-binding protein 23	0.02	Orthogroups_2024-Update
Potri.015G099200	No alias	WRKY DNA-binding protein 75	0.02	Orthogroups_2024-Update
Pp1s35_401V6	No alias	wrky transcription	0.02	Orthogroups_2024-Update
Seita.5G032600.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Seita.6G218000.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.7G301900.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.7G302000.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.8G012800.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.9G421700.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.003G242800.2	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G285500.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.007G077466.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Solyc02g032950	No alias	WRKY transcription factor 16	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004425	indole-3-glycerol-phosphate synthase activity	IEP	Predicted GO
MF	GO:0016831	carboxy-lyase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	74	131

External Links

No external refs found!

PSME_00000342-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation