1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00000367-RA

PSME_00000367-RA


Description : (at5g50200 : 170.0) Wound-responsive gene 3 (WR3). Encodes a high-affinity nitrate transporter. Up-regulated by nitrate. Involved in jasmonic acid-independent wound signal transduction.; WOUND-RESPONSIVE 3 (WR3); FUNCTIONS IN: nitrate transmembrane transporter activity; INVOLVED IN: nitrate transport, response to nitrate, response to wounding; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Transporter, high affinity nitrate, Nar2 (InterPro:IPR016605); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT4G24730.4); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 340.0) & (original description: no original description)


Gene families : OG_42_0002015 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002015_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00000367-RA
Cluster HCCA clusters: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
227648 No alias nitrate transmembrane transporters 0.03 Orthogroups_2024-Update
GRMZM2G163494 No alias nitrate transmembrane transporters 0.03 Orthogroups_2024-Update
GRMZM2G179294 No alias nitrate transmembrane transporters 0.03 Orthogroups_2024-Update
MA_108756g0010 No alias (at5g50200 : 166.0) Wound-responsive gene 3 (WR3). ... 0.03 Orthogroups_2024-Update
Solyc03g112090 No alias high-affinity nitrate transporter-like protein (AHRD... 0.03 Orthogroups_2024-Update
Solyc03g112100 No alias high-affinity nitrate transporter-like protein (AHRD... 0.02 Orthogroups_2024-Update
Sopen03g031200 No alias hypothetical protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0010167 response to nitrate IEA InterProScan predictions
BP GO:0015706 nitrate transport IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR016605 Transptr_NO3_Nar2 28 203
No external refs found!