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  5. PSME_00000385-RA

PSME_00000385-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0007310 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007310_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00000385-RA
Cluster HCCA clusters: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
88215 No alias target of rapamycin 0.05 Orthogroups_2024-Update
Bradi1g09310 No alias target of rapamycin 0.03 Orthogroups_2024-Update
Pp1s51_180V6 No alias pi-3-kinase-related kinase smg-1 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEA InterProScan predictions
MF GO:0004674 protein serine/threonine kinase activity IEA InterProScan predictions
BP GO:0016310 phosphorylation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0016597 amino acid binding IEP Predicted GO
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
InterPro domains Description Start Stop
IPR031559 SMG1 804 1322
No external refs found!