PSME_00000442-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000078 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000078_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00000442-RA

Target Alias Description ECC score Gene Family Method Actions
Bradi4g20547 No alias Mitochondrial transcription termination factor family protein 0.05 Orthogroups_2024-Update
Glyma.17G024500 No alias Mitochondrial transcription termination factor family protein 0.04 Orthogroups_2024-Update
LOC_Os05g34160 No alias mTERF domain containing protein, expressed 0.02 Orthogroups_2024-Update
PSME_00009256-RA No alias (at1g62110 : 82.4) Mitochondrial transcription... 0.09 Orthogroups_2024-Update
Potri.004G013100 No alias Mitochondrial transcription termination factor family protein 0.02 Orthogroups_2024-Update
Seita.2G184700.1 No alias mTERF-type transcription factor 0.09 Orthogroups_2024-Update
Seita.4G092000.1 No alias mTERF-type transcription factor 0.09 Orthogroups_2024-Update
Solyc04g072490 No alias Epidermal patterning factor (AHRD V3.3 *** A0A072V8D7_MEDTR) 0.04 Orthogroups_2024-Update
evm.model.tig00001416.3 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
CC GO:0000808 origin recognition complex IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003690 MTERF 3 113
No external refs found!