1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00000654-RA

PSME_00000654-RA


Description : (at2g36290 : 366.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G74300.1); Has 970 Blast hits to 968 proteins in 224 species: Archae - 20; Bacteria - 476; Metazoa - 0; Fungi - 77; Plants - 313; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (reliability: 732.0) & (original description: no original description)


Gene families : OG_42_0000365 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000365_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00000654-RA

Target Alias Description ECC score Gene Family Method Actions
Bradi3g31450 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G434161 No alias alpha/beta-Hydrolases superfamily protein 0.02 Orthogroups_2024-Update
Glyma.11G183900 No alias alpha/beta-Hydrolases superfamily protein 0.02 Orthogroups_2024-Update
Mp2g22980.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
Mp3g13910.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
Seita.1G180500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen09g004270 No alias Alpha/beta hydrolase family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000073 AB_hydrolase_1 56 315
No external refs found!