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  5. PSME_00000732-RA

PSME_00000732-RA


Description : (at4g35140 : 118.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G38480.1); Has 10094 Blast hits to 7474 proteins in 477 species: Archae - 10; Bacteria - 1944; Metazoa - 3788; Fungi - 2083; Plants - 884; Viruses - 0; Other Eukaryotes - 1385 (source: NCBI BLink). & (reliability: 228.0) & (original description: no original description)


Gene families : OG_42_0001946 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001946_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00000732-RA
Cluster HCCA clusters: Cluster_97


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
MF GO:0032947 protein-containing complex scaffold activity IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 165 198
No external refs found!