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  5. PSME_00000887-RA

PSME_00000887-RA


Description : (original description: no original description)


Gene families : OG_42_0001200 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001200_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00000887-RA

Target Alias Description ECC score Gene Family Method Actions
PSME_00001339-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00020964-RA No alias (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00031207-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00040749-RA No alias (original description: no original description) 0.01 Orthogroups_2024-Update
PSME_00049900-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00054229-RA No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
PSME_00055438-RA No alias (original description: no original description) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
MF GO:0061608 nuclear import signal receptor activity IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 247 261
No external refs found!