PSME_00001237-RA

Description : (at5g40660 : 290.0) ATP12 protein-related; INVOLVED IN: proton-transporting ATP synthase complex assembly; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP12, ATPase F1F0-assembly protein (InterPro:IPR011419); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 580.0) & (original description: no original description)

Gene families : OG_42_0006136 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006136_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00001237-RA
Cluster	HCCA clusters: Cluster_184

Type	GO Term	Name	Evidence	Source
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0034622	cellular protein-containing complex assembly	None	Extended
BP	GO:0043461	proton-transporting ATP synthase complex assembly	IEA	InterProScan predictions
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0070071	proton-transporting two-sector ATPase complex assembly	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006364	rRNA processing	IEP	Predicted GO
BP	GO:0006396	RNA processing	IEP	Predicted GO
BP	GO:0008033	tRNA processing	IEP	Predicted GO
MF	GO:0008270	zinc ion binding	IEP	Predicted GO
BP	GO:0016072	rRNA metabolic process	IEP	Predicted GO
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Predicted GO
MF	GO:0017150	tRNA dihydrouridine synthase activity	IEP	Predicted GO
BP	GO:0032259	methylation	IEP	Predicted GO
BP	GO:0034470	ncRNA processing	IEP	Predicted GO
BP	GO:0034660	ncRNA metabolic process	IEP	Predicted GO
MF	GO:0043167	ion binding	IEP	Predicted GO
MF	GO:0046914	transition metal ion binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR011419	ATP12_ATP_synth-F1-assembly	94	218

External Links

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PSME_00001237-RA

Expression Profile

Co-expression Networks

Functional Annotation