1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00001257-RA

PSME_00001257-RA


Description : (at1g22540 : 570.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G72140.1); Has 7676 Blast hits to 7510 proteins in 1439 species: Archae - 0; Bacteria - 3907; Metazoa - 586; Fungi - 484; Plants - 2183; Viruses - 0; Other Eukaryotes - 516 (source: NCBI BLink). & (reliability: 1140.0) & (original description: no original description)


Gene families : OG_42_0000015 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00001257-RA
Cluster HCCA clusters: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
91962 No alias peptide transporter 5 0.03 Orthogroups_2024-Update
A4A49_21916 No alias protein nrt1 ptr family 6.4 0.02 Orthogroups_2024-Update
Brara.G01613.1 No alias anion transporter *(NRT1/PTR) 0.04 Orthogroups_2024-Update
Glyma.03G072100 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G237700 No alias nitrate transporter 1.5 0.04 Orthogroups_2024-Update
Glyma.14G191300 No alias peptide transporter 1 0.04 Orthogroups_2024-Update
Glyma.18G034000 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
LOC_Os06g49250 No alias peptide transporter PTR2, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g02240 No alias peptide transporter PTR2, putative, expressed 0.04 Orthogroups_2024-Update
Pp1s72_96V6 No alias peptide transport-like protein 0.03 Orthogroups_2024-Update
Sobic.003G372100.2 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Sobic.003G392700.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Solyc09g014230 No alias Peptide transporter, putative (AHRD V3.3 *** B9T6M4_RICCO) 0.03 Orthogroups_2024-Update
Sopen12g002020 No alias POT family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0022857 transmembrane transporter activity IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006855 drug transmembrane transport IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR000109 POT_fam 119 553
No external refs found!