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  5. PSME_00001267-RA

PSME_00001267-RA


Description : (q5z9s8|pdr12_orysa : 1556.0) Pleiotropic drug resistance protein 12 - Oryza sativa (Rice) & (at1g59870 : 1547.0) ATP binding cassette transporter. Localized to the plasma membrane in uninfected cells. In infected leaves, the protein concentrated at infection sites. Contributes to nonhost resistance to inappropriate pathogens that enter by direct penetration in a salicylic acidñdependent manner. Required for mlo resistance. Has Cd transporter activity (Cd2+ extrusion pump) and contributes to heavy metal resistance.; PENETRATION 3 (PEN3); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, cadmium ion transmembrane transporter activity; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, plasma membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 7 (TAIR:AT1G15210.1); Has 392230 Blast hits to 282257 proteins in 3986 species: Archae - 7583; Bacteria - 315608; Metazoa - 9692; Fungi - 7346; Plants - 6702; Viruses - 4; Other Eukaryotes - 45295 (source: NCBI BLink). & (reliability: 3094.0) & (original description: no original description)


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00001267-RA
Cluster HCCA clusters: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
415867 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
429390 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
A4A49_31699 No alias pleiotropic drug resistance protein 2 0.03 Orthogroups_2024-Update
At1g15210 No alias PDR7 [Source:UniProtKB/TrEMBL;Acc:A0A178WAD4] 0.04 Orthogroups_2024-Update
Bradi2g04847 No alias pleiotropic drug resistance 4 0.05 Orthogroups_2024-Update
Brara.F01068.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
GRMZM2G477872 No alias pleiotropic drug resistance 11 0.02 Orthogroups_2024-Update
Glyma.02G159900 No alias pleiotropic drug resistance 11 0.04 Orthogroups_2024-Update
Glyma.06G071800 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Glyma.14G127800 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
Glyma.18G063400 No alias pleiotropic drug resistance 3 0.02 Orthogroups_2024-Update
HORVU3Hr1G053380.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
HORVU4Hr1G081040.4 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
MA_10430834g0010 No alias (at1g59870 : 357.0) ATP binding cassette transporter.... 0.03 Orthogroups_2024-Update
MA_10430834g0020 No alias (q7fmw4|pdr15_orysa : 384.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
MA_12965g0010 No alias (q949g3|pdr1_nicpl : 544.0) Pleiotropic drug resistance... 0.04 Orthogroups_2024-Update
MA_135152g0010 No alias (q5z9s8|pdr12_orysa : 1938.0) Pleiotropic drug... 0.05 Orthogroups_2024-Update
MA_3894g0010 No alias (q76cu2|pdr1_tobac : 501.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
PSME_00000869-RA No alias (q5z9s8|pdr12_orysa : 1879.0) Pleiotropic drug... 0.04 Orthogroups_2024-Update
PSME_00001268-RA No alias (at1g59870 : 1834.0) ATP binding cassette transporter.... 0.03 Orthogroups_2024-Update
PSME_00002220-RA No alias (q5z9s8|pdr12_orysa : 1203.0) Pleiotropic drug... 0.03 Orthogroups_2024-Update
PSME_00010410-RA No alias (q8gu88|pdr7_orysa : 1693.0) Putative pleiotropic drug... 0.04 Orthogroups_2024-Update
PSME_00013320-RA No alias (q8gu88|pdr7_orysa : 1886.0) Putative pleiotropic drug... 0.03 Orthogroups_2024-Update
PSME_00013643-RA No alias (q76cu2|pdr1_tobac : 1408.0) Pleiotropic drug resistance... 0.04 Orthogroups_2024-Update
PSME_00015395-RA No alias (q76cu2|pdr1_tobac : 1904.0) Pleiotropic drug resistance... 0.08 Orthogroups_2024-Update
PSME_00017232-RA No alias (q76cu2|pdr1_tobac : 838.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
Potri.001G048900 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
Potri.001G189500 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.03 Orthogroups_2024-Update
Pp1s170_10V6 No alias atp-binding cassette 0.02 Orthogroups_2024-Update
Seita.2G335300.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Seita.4G181500.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Seita.5G115400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G221500.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Seita.5G221600.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Seita.5G221700.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.003G216000.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
Sobic.003G216166.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Sobic.003G216232.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.004G087800.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.006G114100.4 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Solyc05g055330 No alias Drug resistance transporter-like ABC domain protein... 0.03 Orthogroups_2024-Update
Solyc06g076930 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.05 Orthogroups_2024-Update
Solyc11g007280 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.04 Orthogroups_2024-Update
Solyc11g007290 No alias No description available 0.03 Orthogroups_2024-Update
Solyc12g098210 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.04 Orthogroups_2024-Update
Solyc12g100190 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.06 Orthogroups_2024-Update
evm.model.tig00021489.3 No alias (at3g21090 : 172.0) ABC-2 type transporter family... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006952 defense response IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
InterPro domains Description Start Stop
IPR013581 PDR_assoc 560 622
IPR013525 ABC_2_trans 1029 1242
IPR013525 ABC_2_trans 344 554
IPR003439 ABC_transporter-like 731 883
IPR003439 ABC_transporter-like 62 262
IPR029481 ABC_trans_N 2 35
No external refs found!