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  5. PSME_00001344-RA

PSME_00001344-RA


Description : (p45582|bgal_aspof : 301.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (at3g13750 : 290.0) beta-galactosidase, glycosyl hydrolase family 35; beta galactosidase 1 (BGAL1); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 3 (TAIR:AT4G36360.1); Has 2213 Blast hits to 2119 proteins in 468 species: Archae - 15; Bacteria - 882; Metazoa - 391; Fungi - 211; Plants - 629; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (reliability: 580.0) & (original description: no original description)


Gene families : OG_42_0000109 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000109_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00001344-RA
Cluster HCCA clusters: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
At2g16730 No alias Beta-galactosidase 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCU9] 0.02 Orthogroups_2024-Update
Bradi2g24670 No alias beta-galactosidase 16 0.03 Orthogroups_2024-Update
Bradi2g56607 No alias beta-galactosidase 10 0.03 Orthogroups_2024-Update
Bradi3g49460 No alias beta-galactosidase 7 0.02 Orthogroups_2024-Update
Brara.C04158.1 No alias beta-galactosidase *(MUM2) & EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
Brara.F02262.1 No alias beta-galactosidase *(MUM2) & EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Brara.J01553.1 No alias beta-galactosidase *(BGAL7) & EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Brara.K00159.1 No alias beta-galactosidase *(BGAL1) & EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Brara.K00317.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G038281 No alias beta-galactosidase 10 0.04 Orthogroups_2024-Update
Glyma.07G010400 No alias beta galactosidase 1 0.02 Orthogroups_2024-Update
Glyma.11G107600 No alias glycosyl hydrolase family 35 protein 0.02 Orthogroups_2024-Update
Glyma.13G327000 No alias beta-galactosidase 8 0.02 Orthogroups_2024-Update
HORVU3Hr1G050450.1 No alias EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
HORVU7Hr1G057460.1 No alias beta-galactosidase *(MUM2) & EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
LOC_Os01g39830 No alias beta-galactosidase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g37560 No alias beta-galactosidase precursor, putative, expressed 0.02 Orthogroups_2024-Update
MA_10430979g0010 No alias (at2g28470 : 344.0) putative beta-galactosidase (BGAL8... 0.04 Orthogroups_2024-Update
MA_65469g0020 No alias (at2g28470 : 353.0) putative beta-galactosidase (BGAL8... 0.05 Orthogroups_2024-Update
MA_87238g0010 No alias (at2g32810 : 705.0) putative beta-galactosidase; beta... 0.04 Orthogroups_2024-Update
PSME_00024392-RA No alias (at1g45130 : 134.0) beta-galactosidase 5 (BGAL5);... 0.03 Orthogroups_2024-Update
PSME_00036669-RA No alias (at4g36360 : 122.0) putative beta-galactosidase (BGAL3... 0.03 Orthogroups_2024-Update
Potri.005G232600 No alias beta-galactosidase 3 0.03 Orthogroups_2024-Update
Potri.006G144500 No alias beta galactosidase 1 0.03 Orthogroups_2024-Update
Seita.2G290500.1 No alias beta-galactosidase *(MUM2) & EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Sobic.002G279900.1 No alias beta-galactosidase *(MUM2) & EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
Solyc01g110000 No alias Beta-galactosidase (AHRD V3.3 *** A0A0V0ITW0_SOLCH) 0.03 Orthogroups_2024-Update
Solyc03g121540 No alias beta-galactosidase 3 0.02 Orthogroups_2024-Update
Solyc07g038110 No alias Beta-galactosidase (AHRD V3.3 *-* V7C958_PHAVU) 0.03 Orthogroups_2024-Update
Solyc07g038130 No alias Beta-galactosidase (AHRD V3.3 *-* A0A103XKB3_CYNCS) 0.03 Orthogroups_2024-Update
Sopen10g025240 No alias Glycosyl hydrolases family 35 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000922 Lectin_gal-bd_dom 406 482
No external refs found!