PSME_00001412-RA

Description : (at2g02450 : 284.0) NAC domain containing protein 35 (NAC035); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 94 (TAIR:AT5G39820.1); Has 5401 Blast hits to 4721 proteins in 140 species: Archae - 0; Bacteria - 7; Metazoa - 144; Fungi - 68; Plants - 2924; Viruses - 5; Other Eukaryotes - 2253 (source: NCBI BLink). & (q7f2l3|nac48_orysa : 177.0) NAC domain-containing protein 48 (ONAC048) - Oryza sativa (Rice) & (reliability: 568.0) & (original description: no original description)

Gene families : OG_42_0000084 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000084_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00001412-RA
Cluster	HCCA clusters: Cluster_43

Target	Alias	Description	ECC score	Gene Family Method
147012	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
A4A49_25676	No alias	nac transcription factor 25	0.03	Orthogroups_2024-Update
Bradi1g04150	No alias	NAC domain containing protein 102	0.03	Orthogroups_2024-Update
Bradi2g03467	No alias	NAC domain containing protein 25	0.03	Orthogroups_2024-Update
GRMZM2G042494	No alias	NAC-like, activated by AP3/PI	0.03	Orthogroups_2024-Update
Glyma.01G051300	No alias	NAC-like, activated by AP3/PI	0.04	Orthogroups_2024-Update
Glyma.04G208300	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
Glyma.06G166500	No alias	NAC domain containing protein 83	0.05	Orthogroups_2024-Update
Glyma.07G271100	No alias	NAC domain containing protein 35	0.06	Orthogroups_2024-Update
Glyma.12G148900	No alias	NAC domain containing protein 2	0.03	Orthogroups_2024-Update
Glyma.12G221500	No alias	NAC domain containing protein 3	0.03	Orthogroups_2024-Update
LOC_Os12g07790	No alias	no apical meristem protein, putative, expressed	0.02	Orthogroups_2024-Update
MA_123846g0010	No alias	(at3g15510 : 259.0) Note of caution: not to be confused...	0.03	Orthogroups_2024-Update
MA_137415g0010	No alias	(at1g61110 : 273.0) NAC domain containing protein 25...	0.04	Orthogroups_2024-Update
PSME_00030259-RA	No alias	(q7f2l3\|nac48_orysa : 263.0) NAC domain-containing...	0.05	Orthogroups_2024-Update
PSME_00048798-RA	No alias	(at1g52880 : 289.0) Transcription factor with a NAC...	0.05	Orthogroups_2024-Update
PSME_00053192-RA	No alias	(at1g52880 : 257.0) Transcription factor with a NAC...	0.03	Orthogroups_2024-Update
Potri.001G404400	No alias	NAC domain containing protein 2	0.03	Orthogroups_2024-Update
Potri.004G230800	No alias	NAC domain containing protein 35	0.02	Orthogroups_2024-Update
Potri.006G129400	No alias	NAC domain containing protein 25	0.03	Orthogroups_2024-Update
Seita.5G069100.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Seita.5G405100.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Seita.6G089300.1	No alias	NAC-type transcription factor	0.06	Orthogroups_2024-Update
Seita.8G008100.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Seita.9G417600.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.009G140500.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Sopen05g003630	No alias	No apical meristem (NAM) protein	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Predicted GO
MF	GO:0004556	alpha-amylase activity	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
BP	GO:0007165	signal transduction	IEP	Predicted GO
MF	GO:0016160	amylase activity	IEP	Predicted GO
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predicted GO
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	Predicted GO
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
MF	GO:0043167	ion binding	IEP	Predicted GO
MF	GO:0043169	cation binding	IEP	Predicted GO
MF	GO:0045300	acyl-[acyl-carrier-protein] desaturase activity	IEP	Predicted GO
MF	GO:0046872	metal ion binding	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO
MF	GO:0048037	cofactor binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	29	153

External Links

No external refs found!

PSME_00001412-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation