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  5. PSME_00001452-RA

PSME_00001452-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000235 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000235_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00001452-RA
Cluster HCCA clusters: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
Bradi3g59520 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
Bradi4g26300 No alias Auxin efflux carrier family protein 0.02 Orthogroups_2024-Update
Glyma.09G117900 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
Glyma.18G255800 No alias Auxin efflux carrier family protein 0.02 Orthogroups_2024-Update
Glyma.19G128800 No alias Auxin efflux carrier family protein 0.04 Orthogroups_2024-Update
PSME_00036388-RA No alias (at1g70940 : 405.0) A regulator of auxin efflux and... 0.03 Orthogroups_2024-Update
Potri.012G047200 No alias Auxin efflux carrier family protein 0.02 Orthogroups_2024-Update
Pp1s402_39V6 No alias pind5-like auxin efflux carrier 0.02 Orthogroups_2024-Update
Seita.4G101300.1 No alias auxin efflux transporter *(PIN) & auxin transporter *(PIN) 0.03 Orthogroups_2024-Update
Seita.7G323600.1 No alias auxin efflux transporter *(PIN) & auxin transporter *(PIN) 0.02 Orthogroups_2024-Update
Sopen05g003900 No alias Membrane transport protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
InterPro domains Description Start Stop
IPR004776 Mem_trans 3 57
No external refs found!