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  5. PSME_00001513-RA

PSME_00001513-RA


Description : (at4g13660 : 336.0) Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows preference for pinoresinol and not lariciresinol.; pinoresinol reductase 2 (PRR2); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: pinoresinol reductase 1 (TAIR:AT1G32100.1); Has 1530 Blast hits to 1530 proteins in 324 species: Archae - 16; Bacteria - 400; Metazoa - 3; Fungi - 451; Plants - 554; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (p52579|ifrh_tobac : 238.0) Isoflavone reductase homolog A622 (EC 1.3.1.-) - Nicotiana tabacum (Common tobacco) & (reliability: 668.0) & (original description: no original description)


Gene families : OG_42_0000162 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000162_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00001513-RA

Target Alias Description ECC score Gene Family Method Actions
Glyma.01G172700 No alias NmrA-like negative transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Glyma.01G172900 No alias NmrA-like negative transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Glyma.06G030900 No alias NmrA-like negative transcriptional regulator family protein 0.03 Orthogroups_2024-Update
PSME_00009016-RA No alias (at1g32100 : 307.0) Encodes a pinoresinol reductase... 0.03 Orthogroups_2024-Update
PSME_00044715-RA No alias (at4g39230 : 367.0) encodes a protein whose sequence is... 0.04 Orthogroups_2024-Update
PSME_00045917-RA No alias (at1g75290 : 218.0) encodes a protein whose sequence is... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR008030 NmrA-like 10 236
No external refs found!