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PSME_00001543-RA


Description : (at5g07830 : 551.0) Belongs to the plant glycoside hydrolase family 79. Encodes a protein with several posttranslational modification sites including O-β-GlcNAc attachment sites and serine-, threonine- and tyrosine-phosphorylation sites, suggesting that this protein is extensively modified posttranslationally. The protein is predicted (WoLF PSORT program) to be membrane-associated.; glucuronidase 2 (GUS2); FUNCTIONS IN: beta-glucuronidase activity; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 79, N-terminal (InterPro:IPR005199); BEST Arabidopsis thaliana protein match is: glucuronidase 1 (TAIR:AT5G61250.1); Has 380 Blast hits to 370 proteins in 68 species: Archae - 0; Bacteria - 29; Metazoa - 190; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 1032.0) & (original description: no original description)


Gene families : OG_42_0000925 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000925_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Pseudotsuga release: PSME_00001543-RA
Cluster HCCA clusters: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
A4A49_16834 No alias heparanase-like protein 3 0.02 Orthogroups_2024-Update
At5g34940 No alias Heparanase-like protein 3... 0.05 Orthogroups_2024-Update
Glyma.05G023200 No alias glucuronidase 2 0.02 Orthogroups_2024-Update
MA_10433885g0020 No alias (at5g34940 : 566.0) The protein is predicted (WoLF... 0.03 Orthogroups_2024-Update
MA_77698g0010 No alias (at5g34940 : 552.0) The protein is predicted (WoLF... 0.03 Orthogroups_2024-Update
Solyc05g012540 No alias Heparanase, putative (AHRD V3.3 *** B9RCW6_RICCO) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005534 galactose binding IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0048029 monosaccharide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR005199 Glyco_hydro_79 534 796
IPR005199 Glyco_hydro_79 30 347
No external refs found!