Description : (at2g42890 : 525.0) A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML2 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. AML2 is expressed during early embryo development (heart and torpedo stage) and predominantly in vegetative organs; no significant accumulation was detected in floral apices.; MEI2-like 2 (ML2); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: MEI2-like protein 5 (TAIR:AT1G29400.2); Has 7605 Blast hits to 6029 proteins in 352 species: Archae - 6; Bacteria - 46; Metazoa - 4200; Fungi - 1128; Plants - 1425; Viruses - 0; Other Eukaryotes - 800 (source: NCBI BLink). & (q27k34|pla2_orysa : 107.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (reliability: 1050.0) & (original description: no original description)
Gene families : OG_42_0001046 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001046_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00001753-RA | |
Cluster | HCCA clusters: Cluster_249 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
440826 | No alias | MEI2-like protein 5 | 0.03 | Orthogroups_2024-Update | |
Bradi2g39990 | No alias | MEI2-like protein 1 | 0.03 | Orthogroups_2024-Update | |
Glyma.05G200300 | No alias | MEI2-like 4 | 0.04 | Orthogroups_2024-Update | |
Glyma.08G007700 | No alias | MEI2-like protein 1 | 0.03 | Orthogroups_2024-Update | |
Glyma.08G257400 | No alias | MEI2-like protein 1 | 0.03 | Orthogroups_2024-Update | |
Potri.003G162700 | No alias | MEI2-like protein 1 | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003779 | actin binding | IEP | Predicted GO |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Predicted GO |
MF | GO:0005515 | protein binding | IEP | Predicted GO |
MF | GO:0005516 | calmodulin binding | IEP | Predicted GO |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Predicted GO |
BP | GO:0007010 | cytoskeleton organization | IEP | Predicted GO |
MF | GO:0009055 | electron transfer activity | IEP | Predicted GO |
BP | GO:0009889 | regulation of biosynthetic process | IEP | Predicted GO |
BP | GO:0010468 | regulation of gene expression | IEP | Predicted GO |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0015969 | guanosine tetraphosphate metabolic process | IEP | Predicted GO |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0019222 | regulation of metabolic process | IEP | Predicted GO |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Predicted GO |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | Predicted GO |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Predicted GO |
BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | Predicted GO |
BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | Predicted GO |
BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | Predicted GO |
BP | GO:0034035 | purine ribonucleoside bisphosphate metabolic process | IEP | Predicted GO |
BP | GO:0042278 | purine nucleoside metabolic process | IEP | Predicted GO |
MF | GO:0042393 | histone binding | IEP | Predicted GO |
BP | GO:0046128 | purine ribonucleoside metabolic process | IEP | Predicted GO |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | Predicted GO |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Predicted GO |
BP | GO:0080090 | regulation of primary metabolic process | IEP | Predicted GO |
BP | GO:1901068 | guanosine-containing compound metabolic process | IEP | Predicted GO |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Predicted GO |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Predicted GO |
No external refs found! |