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  5. PSME_00001761-RA

PSME_00001761-RA


Description : (q5z9s8|pdr12_orysa : 1822.0) Pleiotropic drug resistance protein 12 - Oryza sativa (Rice) & (at1g59870 : 1793.0) ATP binding cassette transporter. Localized to the plasma membrane in uninfected cells. In infected leaves, the protein concentrated at infection sites. Contributes to nonhost resistance to inappropriate pathogens that enter by direct penetration in a salicylic acidñdependent manner. Required for mlo resistance. Has Cd transporter activity (Cd2+ extrusion pump) and contributes to heavy metal resistance.; PENETRATION 3 (PEN3); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, cadmium ion transmembrane transporter activity; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, plasma membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 7 (TAIR:AT1G15210.1); Has 392230 Blast hits to 282257 proteins in 3986 species: Archae - 7583; Bacteria - 315608; Metazoa - 9692; Fungi - 7346; Plants - 6702; Viruses - 4; Other Eukaryotes - 45295 (source: NCBI BLink). & (reliability: 3586.0) & (original description: no original description)


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00001761-RA
Cluster HCCA clusters: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
412710 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
417266 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
426328 No alias pleiotropic drug resistance 6 0.04 Orthogroups_2024-Update
441717 No alias pleiotropic drug resistance 12 0.04 Orthogroups_2024-Update
441722 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
96729 No alias pleiotropic drug resistance 1 0.04 Orthogroups_2024-Update
A4A49_09054 No alias pleiotropic drug resistance protein 1 0.02 Orthogroups_2024-Update
A4A49_10347 No alias pleiotropic drug resistance protein 1 0.02 Orthogroups_2024-Update
At1g15520 No alias ABC transporter G family member 40... 0.02 Orthogroups_2024-Update
Bradi1g26040 No alias pleiotropic drug resistance 6 0.02 Orthogroups_2024-Update
Bradi1g38025 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.02 Orthogroups_2024-Update
Bradi2g04847 No alias pleiotropic drug resistance 4 0.02 Orthogroups_2024-Update
Bradi2g10110 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Bradi2g43150 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Brara.C01827.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
Brara.D02216.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Glyma.03G192700 No alias pleiotropic drug resistance 11 0.04 Orthogroups_2024-Update
Glyma.10G203000 No alias pleiotropic drug resistance 11 0.02 Orthogroups_2024-Update
Glyma.13G361900 No alias pleiotropic drug resistance 12 0.04 Orthogroups_2024-Update
HORVU3Hr1G053380.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
HORVU3Hr1G071470.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Kfl00056_0220 kfl00056_0220_v1.1 (q7pc80|pdr1_orysa : 1395.0) Probable pleiotropic drug... 0.01 Orthogroups_2024-Update
Kfl00361_0030 kfl00361_0030_v1.1 (q5z9s8|pdr12_orysa : 1282.0) Pleiotropic drug... 0.03 Orthogroups_2024-Update
Kfl00616_0050 kfl00616_0050_v1.1 (at1g59870 : 1348.0) ATP binding cassette transporter.... 0.01 Orthogroups_2024-Update
LOC_Os08g43120 No alias Plant PDR ABC transporter associated domain containing... 0.02 Orthogroups_2024-Update
LOC_Os09g16458 No alias pleiotropic drug resistance protein 4, putative, expressed 0.02 Orthogroups_2024-Update
MA_10429200g0010 No alias (at2g36380 : 249.0) pleiotropic drug resistance 6... 0.03 Orthogroups_2024-Update
MA_949447g0010 No alias (q8gu92|pdr2_orysa : 473.0) Probable pleiotropic drug... 0.03 Orthogroups_2024-Update
Mp8g09300.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
PSME_00000869-RA No alias (q5z9s8|pdr12_orysa : 1879.0) Pleiotropic drug... 0.07 Orthogroups_2024-Update
PSME_00007073-RA No alias (q8gu88|pdr7_orysa : 1875.0) Putative pleiotropic drug... 0.03 Orthogroups_2024-Update
PSME_00008988-RA No alias (q5z9s8|pdr12_orysa : 1221.0) Pleiotropic drug... 0.02 Orthogroups_2024-Update
PSME_00009192-RA No alias (q8gu88|pdr7_orysa : 1875.0) Putative pleiotropic drug... 0.04 Orthogroups_2024-Update
PSME_00010410-RA No alias (q8gu88|pdr7_orysa : 1693.0) Putative pleiotropic drug... 0.03 Orthogroups_2024-Update
PSME_00037776-RA No alias (at1g59870 : 665.0) ATP binding cassette transporter.... 0.01 Orthogroups_2024-Update
Potri.001G048900 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
Potri.001G049000 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Potri.001G175700 No alias pleiotropic drug resistance 12 0.04 Orthogroups_2024-Update
Pp1s36_257V6 No alias atp-binding cassette 0.02 Orthogroups_2024-Update
Seita.1G041000.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Seita.2G179600.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Seita.5G221500.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Seita.5G221600.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Seita.5G221700.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.002G203800.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.003G215600.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.003G215800.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
Sobic.003G216166.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
Sobic.003G216232.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
Sobic.003G216300.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Sobic.004G087700.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Solyc08g067620 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
MF GO:0000287 magnesium ion binding IEP Predicted GO
BP GO:0000902 cell morphogenesis IEP Predicted GO
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Predicted GO
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
BP GO:0006879 cellular iron ion homeostasis IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008199 ferric iron binding IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009653 anatomical structure morphogenesis IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Predicted GO
MF GO:0015020 glucuronosyltransferase activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0032989 cellular component morphogenesis IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
BP GO:0048869 cellular developmental process IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055072 iron ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 522 732
IPR013525 ABC_2_trans 1209 1422
IPR003439 ABC_transporter-like 185 367
IPR029481 ABC_trans_N 51 159
IPR013581 PDR_assoc 749 807
IPR003439 ABC_transporter-like 911 1063
No external refs found!