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  5. PSME_00001762-RA

PSME_00001762-RA


Description : (q5z9s8|pdr12_orysa : 1873.0) Pleiotropic drug resistance protein 12 - Oryza sativa (Rice) & (at1g59870 : 1862.0) ATP binding cassette transporter. Localized to the plasma membrane in uninfected cells. In infected leaves, the protein concentrated at infection sites. Contributes to nonhost resistance to inappropriate pathogens that enter by direct penetration in a salicylic acidñdependent manner. Required for mlo resistance. Has Cd transporter activity (Cd2+ extrusion pump) and contributes to heavy metal resistance.; PENETRATION 3 (PEN3); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, cadmium ion transmembrane transporter activity; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, plasma membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 7 (TAIR:AT1G15210.1); Has 392230 Blast hits to 282257 proteins in 3986 species: Archae - 7583; Bacteria - 315608; Metazoa - 9692; Fungi - 7346; Plants - 6702; Viruses - 4; Other Eukaryotes - 45295 (source: NCBI BLink). & (reliability: 3724.0) & (original description: no original description)


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00001762-RA
Cluster HCCA clusters: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
267739 No alias pleiotropic drug resistance 6 0.02 Orthogroups_2024-Update
At3g53480 No alias ABC transporter G family member 37... 0.03 Orthogroups_2024-Update
Glyma.02G159900 No alias pleiotropic drug resistance 11 0.02 Orthogroups_2024-Update
Kfl00616_0050 kfl00616_0050_v1.1 (at1g59870 : 1348.0) ATP binding cassette transporter.... 0.01 Orthogroups_2024-Update
LOC_Os01g08260 No alias pleiotropic drug resistance protein 4, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g13720 No alias Plant PDR ABC transporter associated domain containing... 0.03 Orthogroups_2024-Update
MA_10430834g0020 No alias (q7fmw4|pdr15_orysa : 384.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
MA_42871g0010 No alias (at1g59870 : 335.0) ATP binding cassette transporter.... 0.03 Orthogroups_2024-Update
Mp8g09300.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
PSME_00014724-RA No alias (q76cu2|pdr1_tobac : 1860.0) Pleiotropic drug resistance... 0.04 Orthogroups_2024-Update
Sobic.004G254100.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Solyc09g091670 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc12g098210 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.02 Orthogroups_2024-Update
Sopen11g003180 No alias ABC-2 type transporter 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
MF GO:0004668 protein-arginine deiminase activity IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006787 porphyrin-containing compound catabolic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009445 putrescine metabolic process IEP Predicted GO
BP GO:0009446 putrescine biosynthetic process IEP Predicted GO
BP GO:0015994 chlorophyll metabolic process IEP Predicted GO
BP GO:0015996 chlorophyll catabolic process IEP Predicted GO
MF GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033015 tetrapyrrole catabolic process IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0046149 pigment catabolic process IEP Predicted GO
MF GO:0047746 chlorophyllase activity IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 1210 1423
IPR013525 ABC_2_trans 526 736
IPR003439 ABC_transporter-like 912 1064
IPR003439 ABC_transporter-like 189 371
IPR029481 ABC_trans_N 108 163
IPR013581 PDR_assoc 742 804
No external refs found!