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  5. PSME_00001798-RA

PSME_00001798-RA


Description : (at3g19630 : 231.0) Radical SAM superfamily protein; FUNCTIONS IN: iron-sulfur cluster binding, catalytic activity, RNA methyltransferase activity; INVOLVED IN: rRNA processing; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal RNA large subunit methyltransferase RlmN; (InterPro:IPR004383), Radical SAM (InterPro:IPR007197); BEST Arabidopsis thaliana protein match is: Radical SAM superfamily protein (TAIR:AT1G60230.1); Has 6931 Blast hits to 6927 proteins in 2338 species: Archae - 5; Bacteria - 5129; Metazoa - 1; Fungi - 1; Plants - 138; Viruses - 3; Other Eukaryotes - 1654 (source: NCBI BLink). & (reliability: 462.0) & (original description: no original description)


Gene families : OG_42_0007170 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007170_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Pseudotsuga release: PSME_00001798-RA


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006401 RNA catabolic process IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
BP GO:0019439 aromatic compound catabolic process IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0032299 ribonuclease H2 complex IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
BP GO:0046700 heterocycle catabolic process IEP Predicted GO
BP GO:1901361 organic cyclic compound catabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!