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  5. PSME_00001828-RA

PSME_00001828-RA


Description : (at1g76880 : 228.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT1G76890.2); Has 4096 Blast hits to 3293 proteins in 319 species: Archae - 0; Bacteria - 232; Metazoa - 1014; Fungi - 378; Plants - 799; Viruses - 55; Other Eukaryotes - 1618 (source: NCBI BLink). & (reliability: 456.0) & (original description: no original description)


Gene families : OG_42_0000788 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000788_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00001828-RA
Cluster HCCA clusters: Cluster_236

Target Alias Description ECC score Gene Family Method Actions
A4A49_32631 No alias trihelix transcription factor gt-2 0.03 Orthogroups_2024-Update
At1g33240 No alias GT-2-like 1 [Source:TAIR;Acc:AT1G33240] 0.02 Orthogroups_2024-Update
Bradi5g17150 No alias Duplicated homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
Glyma.02G082000 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.06G149900 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.16G167500 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.018G049666 No alias GT-2-like 1 0.03 Orthogroups_2024-Update
Sobic.006G163600.3 No alias Trihelix-type transcription factor 0.04 Orthogroups_2024-Update
Sopen11g001390 No alias Myb/SANT-like DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!