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  5. PSME_00001890-RA

PSME_00001890-RA


Description : (at5g21326 : 229.0) Ca2+regulated serine-threonine protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 3 (TAIR:AT2G26980.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 210.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 458.0) & (original description: no original description)


Gene families : OG_42_0000034 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000034_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00001890-RA
Cluster HCCA clusters: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
Bradi4g44460 No alias SOS3-interacting protein 1 0.03 Orthogroups_2024-Update
Glyma.06G062100 No alias CBL-interacting protein kinase 25 0.05 Orthogroups_2024-Update
HORVU7Hr1G089510.1 No alias SnRK3 SNF1-related protein kinase & CBL-dependent... 0.02 Orthogroups_2024-Update
MA_9913196g0010 No alias (at5g45820 : 480.0) Encodes a CBL-interacting... 0.05 Orthogroups_2024-Update
PSME_00005076-RA No alias (at5g45820 : 566.0) Encodes a CBL-interacting... 0.02 Orthogroups_2024-Update
PSME_00043170-RA No alias (at1g30270 : 261.0) Arabidopsis thaliana CBL-interacting... 0.07 Orthogroups_2024-Update
PSME_00049702-RA No alias (at5g45820 : 500.0) Encodes a CBL-interacting... 0.02 Orthogroups_2024-Update
Potri.019G127500 No alias SOS3-interacting protein 1 0.02 Orthogroups_2024-Update
Pp1s30_102V6 No alias F12P21.6; CBL-interacting protein kinase 23 (CIPK23)... 0.01 Orthogroups_2024-Update
evm.model.contig_3557.1 No alias (at1g01140 : 246.0) Encodes a CBL-interacting protein... 0.01 Orthogroups_2024-Update
evm.model.contig_527.13 No alias (at2g26980 : 286.0) encodes a serine-threonine protein... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
InterPro domains Description Start Stop
IPR004041 NAF_dom 125 181
IPR001772 KA1_dom 215 243
No external refs found!