1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen05g018290

Sopen05g018290


Description : SAD/SRA domain


Gene families : OG_42_0002900 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002900_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g018290
Cluster HCCA clusters: Cluster_336

Target Alias Description ECC score Gene Family Method Actions
At1g57820 No alias E3 ubiquitin-protein ligase ORTHRUS 2... 0.03 Orthogroups_2024-Update
At5g39550 No alias E3 ubiquitin-protein ligase ORTHRUS 1... 0.03 Orthogroups_2024-Update
Brara.G02568.1 No alias regulatory E3 ubiquitin ligase (ORTH/VIM) of... 0.07 Orthogroups_2024-Update
Glyma.02G309100 No alias Zinc finger (C3HC4-type RING finger) family protein 0.03 Orthogroups_2024-Update
Glyma.14G003700 No alias Zinc finger (C3HC4-type RING finger) family protein 0.02 Orthogroups_2024-Update
Kfl00072_0060 kfl00072_0060_v1.... (at1g57820 : 631.0) Encodes a 645-amino acid... 0.02 Orthogroups_2024-Update
Solyc05g023680 No alias RING-finger E3 ubiquitin ligase, putative (AHRD V3.3 ***... 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR027370 Znf-RING_LisH 514 568
IPR003105 SRA_YDG 275 422
No external refs found!