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  5. PSME_00002131-RA

PSME_00002131-RA


Description : (at3g50660 : 553.0) Encodes a 22α hydroxylase whose reaction is a rate-limiting step in brassinosteroid biosynthetic pathway. The protein is a member of CYP90B gene family. CLM is an epi-allele with small, compressed rosette, reduced internode length, and reduced fertility, appears in selfed ddm mutant plants possibly due to loss of cytosine methylation. Transcripts accumulate in actively growing tissues, and GUS expression is negatively regulated by brassinosteroids. Localized in the endoplasmic reticulum. The in vitro expressed protein can perform the C-22 hydroxylation of a variety of C27-, C28- and C29-sterols. Cholesterol was the best substrate, followed by campesterol. Sitosterol was a poor substrate.; DWARF 4 (DWF4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G05690.1); Has 31120 Blast hits to 31036 proteins in 1650 species: Archae - 61; Bacteria - 5303; Metazoa - 10591; Fungi - 5722; Plants - 7996; Viruses - 3; Other Eukaryotes - 1444 (source: NCBI BLink). & (q6f4f5|c724b_orysa : 424.0) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (reliability: 1106.0) & (original description: no original description)


Gene families : OG_42_0000020 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00002131-RA
Cluster HCCA clusters: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
130337 No alias cytochrome P450, family 716, subfamily A, polypeptide 1 0.04 Orthogroups_2024-Update
233532 No alias cytochrome P450, family 718 0.03 Orthogroups_2024-Update
444868 No alias cytochrome P450, family 716, subfamily A, polypeptide 1 0.02 Orthogroups_2024-Update
At5g45340 No alias Abscisic acid 8'-hydroxylase 3... 0.02 Orthogroups_2024-Update
Brara.A00215.1 No alias 3-epi-6-deoxocathasterone 23-monooxygenase & EC_1.14... 0.03 Orthogroups_2024-Update
Brara.J00336.1 No alias ent-kaurene oxidase *(KAO) & EC_1.14 oxidoreductase... 0.06 Orthogroups_2024-Update
Brara.K01317.1 No alias 3-epi-6-deoxocathasterone 23-monooxygenase & EC_1.14... 0.03 Orthogroups_2024-Update
Brara.K01757.1 No alias abscisic acid hydroxylase & EC_1.14 oxidoreductase... 0.04 Orthogroups_2024-Update
GRMZM2G107199 No alias Cytochrome P450 superfamily protein 0.02 Orthogroups_2024-Update
Glyma.02G051600 No alias Cytochrome P450 superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G083000 No alias cytochrome P450, family 707, subfamily A, polypeptide 3 0.03 Orthogroups_2024-Update
Glyma.02G290000 No alias cytochrome P450, family 716, subfamily A, polypeptide 1 0.03 Orthogroups_2024-Update
Glyma.05G170400 No alias cytochrome P450, family 716, subfamily A, polypeptide 1 0.03 Orthogroups_2024-Update
Glyma.07G010700 No alias cytochrome P450, family 90, subfamily D, polypeptide 1 0.04 Orthogroups_2024-Update
Glyma.08G243600 No alias cytochrome P450, family 716, subfamily A, polypeptide 1 0.03 Orthogroups_2024-Update
Glyma.16G168900 No alias cytochrome P450, family 707, subfamily A, polypeptide 3 0.02 Orthogroups_2024-Update
HORVU2Hr1G102260.2 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
HORVU5Hr1G068330.2 No alias abscisic acid hydroxylase & EC_1.14 oxidoreductase... 0.02 Orthogroups_2024-Update
LOC_Os03g12660 No alias cytochrome P450, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g40540 No alias cytochrome P450, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g45519 No alias transposon protein, putative, CACTA, En/Spm sub-class, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g48200 No alias cytochrome P450, putative, expressed 0.02 Orthogroups_2024-Update
Mp3g17510.1 No alias Abscisic acid 8-hydroxylase 4 OS=Arabidopsis thaliana... 0.03 Orthogroups_2024-Update
Mp7g03050.1 No alias Taxane 13-alpha-hydroxylase OS=Taxus cuspidata... 0.03 Orthogroups_2024-Update
Mp7g11110.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.14... 0.02 Orthogroups_2024-Update
PSME_00018027-RA No alias "(at4g19230 : 263.0) Encodes a protein with ABA... 0.03 Orthogroups_2024-Update
PSME_00019087-RA No alias "(at1g12740 : 353.0) encodes a protein with cytochrome... 0.03 Orthogroups_2024-Update
PSME_00021354-RA No alias "(at5g36110 : 431.0) member of CYP716A; ""cytochrome... 0.04 Orthogroups_2024-Update
PSME_00026827-RA No alias (at1g73340 : 379.0) Cytochrome P450 superfamily protein;... 0.03 Orthogroups_2024-Update
PSME_00035402-RA No alias (at1g73340 : 380.0) Cytochrome P450 superfamily protein;... 0.03 Orthogroups_2024-Update
PSME_00035721-RA No alias (at2g32440 : 539.0) ent-kaurenoic acid hydroxylase... 0.07 Orthogroups_2024-Update
PSME_00042598-RA No alias "(at5g36110 : 440.0) member of CYP716A; ""cytochrome... 0.05 Orthogroups_2024-Update
PSME_00049929-RA No alias (at1g73340 : 138.0) Cytochrome P450 superfamily protein;... 0.04 Orthogroups_2024-Update
PSME_00052843-RA No alias "(at5g36110 : 166.0) member of CYP716A; ""cytochrome... 0.03 Orthogroups_2024-Update
PSME_00052975-RA No alias "(at5g36110 : 444.0) member of CYP716A; ""cytochrome... 0.03 Orthogroups_2024-Update
Potri.001G200100 No alias cytochrome P450, family 90, subfamily D, polypeptide 1 0.03 Orthogroups_2024-Update
Potri.001G270500 No alias cytochrome P450, family 87, subfamily A, polypeptide 2 0.02 Orthogroups_2024-Update
Potri.001G422500 No alias cytochrome P450, family 716, subfamily A, polypeptide 1 0.05 Orthogroups_2024-Update
Potri.009G033900 No alias cytochrome P450, family 707, subfamily A, polypeptide 2 0.02 Orthogroups_2024-Update
Potri.011G138000 No alias Cytochrome P450 superfamily protein 0.02 Orthogroups_2024-Update
Potri.018G134700 No alias cytochrome P450, family 716, subfamily A, polypeptide 1 0.04 Orthogroups_2024-Update
Potri.019G080500 No alias cytochrome P450, family 716, subfamily A, polypeptide 1 0.02 Orthogroups_2024-Update
Seita.5G139200.1 No alias 3-epi-6-deoxocathasterone 23-monooxygenase & EC_1.14... 0.02 Orthogroups_2024-Update
Sobic.002G320200.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Sopen01g050440 No alias Cytochrome P450 0.03 Orthogroups_2024-Update
Sopen11g023450 No alias Cytochrome P450 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA InterProScan predictions
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA InterProScan predictions
MF GO:0020037 heme binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
InterPro domains Description Start Stop
IPR001128 Cyt_P450 59 476
No external refs found!