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  5. PSME_00002134-RA

PSME_00002134-RA


Description : (at1g76590 : 113.0) PLATZ transcription factor family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT1G21000.1); Has 404 Blast hits to 404 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 402; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 226.0) & (original description: no original description)


Gene families : OG_42_0000211 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00002134-RA
Cluster HCCA clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
410393 No alias PLATZ transcription factor family protein 0.03 Orthogroups_2024-Update
A4A49_05295 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Brara.G02180.1 No alias PLATZ-type transcription factor 0.04 Orthogroups_2024-Update
Glyma.01G234000 No alias PLATZ transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.12G083000 No alias PLATZ transcription factor family protein 0.04 Orthogroups_2024-Update
PSME_00035067-RA No alias (at2g12646 : 150.0) PLATZ transcription factor family... 0.03 Orthogroups_2024-Update
Sobic.004G057700.1 No alias PLATZ-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.007G167300.1 No alias PLATZ-type transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
CC GO:0005779 integral component of peroxisomal membrane IEP Predicted GO
BP GO:0007031 peroxisome organization IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0010167 response to nitrate IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0015706 nitrate transport IEP Predicted GO
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
BP GO:1901698 response to nitrogen compound IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR006734 DUF597 8 70
No external refs found!