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PSME_00002152-RA


Description : (at5g07050 : 247.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT2G40900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 494.0) & (original description: no original description)


Gene families : OG_42_0000223 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000223_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00002152-RA
Cluster HCCA clusters: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
PSME_00024403-RA No alias (at5g07050 : 419.0) nodulin MtN21 /EamA-like transporter... 0.04 Orthogroups_2024-Update
Potri.006G033500 No alias nodulin MtN21 /EamA-like transporter family protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
InterPro domains Description Start Stop
IPR000620 EamA_dom 15 154
No external refs found!