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  5. PSME_00002173-RA

PSME_00002173-RA


Description : (at4g33240 : 555.0) Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization.; FORMS APLOID AND BINUCLEATE CELLS 1A (FAB1A); CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT3G14270.1). & (reliability: 1110.0) & (original description: no original description)


Gene families : OG_42_0000617 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000617_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00002173-RA
Cluster HCCA clusters: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
Brara.G03018.1 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 Orthogroups_2024-Update
Kfl00651_0080 kfl00651_0080_v1.1 (at3g14270 : 475.0) Encodes a protein that is predicted... 0.02 Orthogroups_2024-Update
PSME_00002174-RA No alias (at3g14270 : 498.0) Encodes a protein that is predicted... 0.03 Orthogroups_2024-Update
PSME_00016766-RA No alias (at3g14270 : 554.0) Encodes a protein that is predicted... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEA InterProScan predictions
BP GO:0046488 phosphatidylinositol metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003883 CTP synthase activity IEP Predicted GO
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predicted GO
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predicted GO
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002498 PInositol-4-P-5-kinase_core 1143 1308
IPR002498 PInositol-4-P-5-kinase_core 1309 1365
No external refs found!