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  5. PSME_00002206-RA

PSME_00002206-RA


Description : (p37831|lox1_soltu : 871.0) Lipoxygenase 1 (EC 1.13.11.12) - Solanum tuberosum (Potato) & (at1g55020 : 869.0) lipoxygenase, a defense gene conferring resistance Xanthomonas campestris; lipoxygenase 1 (LOX1); CONTAINS InterPro DOMAIN/s: Lipoxygenase, iron binding site (InterPro:IPR020833), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase (InterPro:IPR000907), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: PLAT/LH2 domain-containing lipoxygenase family protein (TAIR:AT3G22400.1); Has 1484 Blast hits to 1444 proteins in 180 species: Archae - 0; Bacteria - 84; Metazoa - 533; Fungi - 49; Plants - 793; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 1738.0) & (original description: no original description)


Gene families : OG_42_0000116 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000116_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00002206-RA
Cluster HCCA clusters: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
A4A49_32174 No alias linoleate 13s-lipoxygenase 3-1, chloroplastic 0.03 Orthogroups_2024-Update
Bradi3g39980 No alias lipoxygenase 2 0.06 Orthogroups_2024-Update
Bradi3g59710 No alias PLAT/LH2 domain-containing lipoxygenase family protein 0.02 Orthogroups_2024-Update
Bradi5g11590 No alias lipoxygenase 3 0.03 Orthogroups_2024-Update
Brara.B01571.1 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.04 Orthogroups_2024-Update
Brara.B01730.1 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.03 Orthogroups_2024-Update
Brara.E02008.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.03 Orthogroups_2024-Update
Brara.G02542.1 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.03 Orthogroups_2024-Update
Brara.G02545.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.04 Orthogroups_2024-Update
Brara.I04828.1 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.04 Orthogroups_2024-Update
Glyma.08G189200 No alias lipoxygenase 1 0.03 Orthogroups_2024-Update
Glyma.09G113650 No alias lipoxygenase 1 0.03 Orthogroups_2024-Update
Glyma.13G347600 No alias lipoxygenase 1 0.02 Orthogroups_2024-Update
Glyma.20G054000 No alias lipoxygenase 2 0.03 Orthogroups_2024-Update
LOC_Os02g10120 No alias lipoxygenase, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os02g19790 No alias lipoxygenase 4, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g39840 No alias lipoxygenase, chloroplast precursor, putative, expressed 0.03 Orthogroups_2024-Update
MA_10427506g0020 No alias (p37831|lox1_soltu : 854.0) Lipoxygenase 1 (EC... 0.03 Orthogroups_2024-Update
MA_10436100g0010 No alias (p37831|lox1_soltu : 887.0) Lipoxygenase 1 (EC... 0.03 Orthogroups_2024-Update
MA_138518g0030 No alias (p37831|lox1_soltu : 167.0) Lipoxygenase 1 (EC... 0.03 Orthogroups_2024-Update
MA_161903g0010 No alias (p37831|lox1_soltu : 733.0) Lipoxygenase 1 (EC... 0.04 Orthogroups_2024-Update
MA_184054g0010 No alias (p37831|lox1_soltu : 807.0) Lipoxygenase 1 (EC... 0.03 Orthogroups_2024-Update
MA_8597057g0010 No alias (p29250|lox2_orysa : 298.0) Lipoxygenase 2 (EC... 0.03 Orthogroups_2024-Update
MA_96367g0010 No alias (at3g22400 : 321.0) LOX5; FUNCTIONS IN: oxidoreductase... 0.03 Orthogroups_2024-Update
Mp5g21680.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.02 Orthogroups_2024-Update
PSME_00002208-RA No alias (at1g55020 : 779.0) lipoxygenase, a defense gene... 0.08 Orthogroups_2024-Update
PSME_00006851-RA No alias (p37831|lox1_soltu : 962.0) Lipoxygenase 1 (EC... 0.04 Orthogroups_2024-Update
PSME_00029376-RA No alias (at1g72520 : 1009.0) PLAT/LH2 domain-containing... 0.04 Orthogroups_2024-Update
PSME_00035873-RA No alias (at1g17420 : 1123.0) Lipoxygenase; lipoxygenase 3... 0.04 Orthogroups_2024-Update
PSME_00048663-RA No alias (at1g55020 : 448.0) lipoxygenase, a defense gene... 0.07 Orthogroups_2024-Update
Potri.001G015400 No alias lipoxygenase 2 0.03 Orthogroups_2024-Update
Pp1s434_27V6 No alias af361893_1bacterial-induced lipoxygenase 0.04 Orthogroups_2024-Update
Pp1s70_182V6 No alias lipoxygenase 0.02 Orthogroups_2024-Update
Seita.5G411600.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.02 Orthogroups_2024-Update
Seita.6G205300.1 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.03 Orthogroups_2024-Update
Seita.9G127700.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.04 Orthogroups_2024-Update
Sobic.001G125700.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.03 Orthogroups_2024-Update
Sobic.001G125800.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.03 Orthogroups_2024-Update
Sobic.003G385900.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.03 Orthogroups_2024-Update
Sobic.006G248300.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.03 Orthogroups_2024-Update
Solyc08g029000 No alias Lipoxygenase (AHRD V3.3 *** Q43800_TOBAC) 0.04 Orthogroups_2024-Update
Solyc09g075870 No alias Lipoxygenase (AHRD V3.3 *** A0A0V0IV70_SOLCH) 0.02 Orthogroups_2024-Update
Sopen05g009950 No alias Lipoxygenase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013819 LipOase_C 188 262
IPR013819 LipOase_C 260 824
No external refs found!