PSME_00002258-RA

Description : (at3g47570 : 249.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 172.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 498.0) & (original description: no original description)

Gene families : OG_42_0000007 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00002258-RA
Cluster	HCCA clusters: Cluster_72

Target	Alias	Description	ECC score	Gene Family Method
Glyma.18G199200	No alias	Leucine-rich repeat protein kinase family protein	0.03	Orthogroups_2024-Update
HORVU2Hr1G127100.9	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
HORVU3Hr1G066650.13	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.03	Orthogroups_2024-Update
LOC_Os06g08710	No alias	receptor-like protein kinase precursor, putative, expressed	0.02	Orthogroups_2024-Update
MA_10430058g0010	No alias	(at3g11080 : 114.0) receptor like protein 35 (RLP35);...	0.04	Orthogroups_2024-Update
MA_10435743g0020	No alias	(at1g35710 : 155.0) Protein kinase family protein with...	0.04	Orthogroups_2024-Update
MA_13546g0010	No alias	(at5g20480 : 145.0) Encodes a predicted leucine-rich...	0.05	Orthogroups_2024-Update
MA_150750g0010	No alias	(at3g47110 : 429.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
MA_4650g0010	No alias	(at5g20480 : 200.0) Encodes a predicted leucine-rich...	0.02	Orthogroups_2024-Update
MA_514155g0010	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
PSME_00006646-RA	No alias	no hits & (original description: no original description)	0.05	Orthogroups_2024-Update
PSME_00011167-RA	No alias	(at4g08850 : 300.0) Leucine-rich repeat receptor-like...	0.03	Orthogroups_2024-Update
PSME_00015358-RA	No alias	(at5g20480 : 637.0) Encodes a predicted leucine-rich...	0.03	Orthogroups_2024-Update
PSME_00016740-RA	No alias	(at4g20140 : 524.0) Encodes GASSHO1 (GSO1), a putative...	0.03	Orthogroups_2024-Update
PSME_00025380-RA	No alias	(at3g24240 : 244.0) Leucine-rich repeat receptor-like...	0.02	Orthogroups_2024-Update
PSME_00031091-RA	No alias	(at5g46330 : 205.0) Encodes a leucine-rich repeat...	0.03	Orthogroups_2024-Update
PSME_00031122-RA	No alias	(at5g46330 : 295.0) Encodes a leucine-rich repeat...	0.03	Orthogroups_2024-Update
PSME_00032810-RA	No alias	(at5g46330 : 206.0) Encodes a leucine-rich repeat...	0.05	Orthogroups_2024-Update
PSME_00039331-RA	No alias	(at3g47110 : 609.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
PSME_00039609-RA	No alias	(at2g24130 : 270.0) Leucine-rich receptor-like protein...	0.04	Orthogroups_2024-Update
PSME_00040826-RA	No alias	(at5g63930 : 192.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00041027-RA	No alias	(at3g24240 : 280.0) Leucine-rich repeat receptor-like...	0.03	Orthogroups_2024-Update
PSME_00042436-RA	No alias	(at5g46330 : 119.0) Encodes a leucine-rich repeat...	0.06	Orthogroups_2024-Update
PSME_00043437-RA	No alias	(at3g12610 : 154.0) Plays role in DNA-damage...	0.04	Orthogroups_2024-Update
PSME_00046894-RA	No alias	(at5g46330 : 162.0) Encodes a leucine-rich repeat...	0.03	Orthogroups_2024-Update
PSME_00048631-RA	No alias	(at5g46330 : 300.0) Encodes a leucine-rich repeat...	0.03	Orthogroups_2024-Update
PSME_00050999-RA	No alias	(at5g46330 : 144.0) Encodes a leucine-rich repeat...	0.05	Orthogroups_2024-Update
PSME_00051245-RA	No alias	(at1g35710 : 388.0) Protein kinase family protein with...	0.04	Orthogroups_2024-Update
PSME_00053750-RA	No alias	(at4g20140 : 428.0) Encodes GASSHO1 (GSO1), a putative...	0.04	Orthogroups_2024-Update
PSME_00054630-RA	No alias	(at3g47110 : 558.0) Leucine-rich repeat protein kinase...	0.02	Orthogroups_2024-Update
PSME_00055531-RA	No alias	(at5g46330 : 107.0) Encodes a leucine-rich repeat...	0.03	Orthogroups_2024-Update
PSME_00055533-RA	No alias	(at3g47110 : 628.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00055651-RA	No alias	(at3g47110 : 645.0) Leucine-rich repeat protein kinase...	0.06	Orthogroups_2024-Update
PSME_00055726-RA	No alias	(at3g47090 : 585.0) Leucine-rich repeat protein kinase...	0.05	Orthogroups_2024-Update
PSME_00055909-RA	No alias	(at3g47110 : 624.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
PSME_00056030-RA	No alias	(at2g26330 : 241.0) Homologous to receptor protein...	0.02	Orthogroups_2024-Update
Sobic.003G068200.3	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.04	Orthogroups_2024-Update
Solyc03g019980	No alias	Receptor-kinase, putative (AHRD V3.3 *** B9SUC9_RICCO)	0.04	Orthogroups_2024-Update
Sopen03g002090	No alias	Leucine rich repeat	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	InterProScan predictions
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Predicted GO
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Predicted GO
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Predicted GO
MF	GO:0001871	pattern binding	IEP	Predicted GO
MF	GO:0005515	protein binding	IEP	Predicted GO
BP	GO:0006397	mRNA processing	IEP	Predicted GO
BP	GO:0006952	defense response	IEP	Predicted GO
BP	GO:0008037	cell recognition	IEP	Predicted GO
BP	GO:0008380	RNA splicing	IEP	Predicted GO
BP	GO:0016071	mRNA metabolic process	IEP	Predicted GO
BP	GO:0022414	reproductive process	IEP	Predicted GO
MF	GO:0030247	polysaccharide binding	IEP	Predicted GO
BP	GO:0048544	recognition of pollen	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000719	Prot_kinase_dom	56	263

External Links

No external refs found!

PSME_00002258-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation