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  5. PSME_00002414-RA

PSME_00002414-RA


Description : (original description: no original description)


Gene families : OG_42_0000490 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000490_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00002414-RA
Cluster HCCA clusters: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
164509 No alias MLP-like protein 423 0.03 Orthogroups_2024-Update
Glyma.09G040500 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.15G146000 No alias Function unknown 0.03 Orthogroups_2024-Update
HORVU4Hr1G054870.4 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_10265000g0010 No alias (original description: no original description) 0.03 Orthogroups_2024-Update
MA_1922g0010 No alias (original description: no original description) 0.07 Orthogroups_2024-Update
MA_224412g0010 No alias (original description: no original description) 0.04 Orthogroups_2024-Update
MA_459474g0010 No alias (original description: no original description) 0.04 Orthogroups_2024-Update
MA_8819148g0010 No alias (original description: no original description) 0.05 Orthogroups_2024-Update
Mp8g14700.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
PSME_00002413-RA No alias (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00024165-RA No alias (original description: no original description) 0.04 Orthogroups_2024-Update
Potri.008G212600 No alias MLP-like protein 423 0.02 Orthogroups_2024-Update
Potri.010G000600 No alias MLP-like protein 423 0.04 Orthogroups_2024-Update
Seita.9G435200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G400700.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.001G400800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.001G400900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G401100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G401200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G401300.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sopen09g033970 No alias Pathogenesis-related protein Bet v I family 0.01 Orthogroups_2024-Update
Sopen12g032770 No alias Pathogenesis-related protein Bet v I family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006952 defense response IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0004000 adenosine deaminase activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006405 RNA export from nucleus IEP Predicted GO
BP GO:0006406 mRNA export from nucleus IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
BP GO:0050657 nucleic acid transport IEP Predicted GO
BP GO:0050658 RNA transport IEP Predicted GO
BP GO:0051028 mRNA transport IEP Predicted GO
BP GO:0051168 nuclear export IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051236 establishment of RNA localization IEP Predicted GO
InterPro domains Description Start Stop
IPR000916 Bet_v_I/MLP 180 336
IPR000916 Bet_v_I/MLP 1 129
No external refs found!