Sopen05g018710

Description : CCT motif

Gene families : OG_42_0006553 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006553_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen05g018710
Cluster	HCCA clusters: Cluster_14

Target	Alias	Description	ECC score	Gene Family Method
At1g28050	No alias	Zinc finger protein CONSTANS-LIKE 15...	0.05	Orthogroups_2024-Update
Bradi3g41500	No alias	B-box type zinc finger protein with CCT domain	0.02	Orthogroups_2024-Update
Brara.G00824.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Glyma.16G050900	No alias	B-box type zinc finger protein with CCT domain	0.03	Orthogroups_2024-Update
Sobic.007G189800.1	No alias	BBX class-II transcription factor	0.02	Orthogroups_2024-Update
Solyc05g024010	No alias	Zinc finger protein CONSTANS-LIKE 14 (AHRD V3.3 *** B9GMQ8_POPTR)	0.08	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR010402	CCT_domain	408	450
IPR000315	Znf_B-box	50	93

External Links

No external refs found!