1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00002530-RA

PSME_00002530-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000030 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000030_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00002530-RA
Cluster HCCA clusters: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
A4A49_26436 No alias leaf rust 10 disease-resistance locus receptor-like... 0.03 Orthogroups_2024-Update
AC193632.2_FG002 No alias PR5-like receptor kinase 0.04 Orthogroups_2024-Update
Bradi1g58120 No alias lectin protein kinase family protein 0.04 Orthogroups_2024-Update
Bradi2g01130 No alias Protein kinase superfamily protein 0.05 Orthogroups_2024-Update
Bradi2g02510 No alias Protein kinase superfamily protein 0.03 Orthogroups_2024-Update
Bradi2g02524 No alias Protein kinase superfamily protein 0.05 Orthogroups_2024-Update
Bradi2g39710 No alias receptor serine/threonine kinase, putative 0.03 Orthogroups_2024-Update
Bradi2g47008 No alias Protein kinase superfamily protein 0.03 Orthogroups_2024-Update
Bradi2g47060 No alias Protein kinase superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g07617 No alias lectin protein kinase family protein 0.03 Orthogroups_2024-Update
Bradi5g24737 No alias lectin protein kinase family protein 0.02 Orthogroups_2024-Update
Bradi5g24760 No alias S-domain-2 5 0.08 Orthogroups_2024-Update
Brara.G01427.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.04 Orthogroups_2024-Update
Brara.K00455.1 No alias Thaumatin protein kinase & EC_2.7 transferase... 0.04 Orthogroups_2024-Update
GRMZM2G007477 No alias S-domain-2 5 0.03 Orthogroups_2024-Update
GRMZM2G076212 No alias S-domain-2 5 0.03 Orthogroups_2024-Update
GRMZM2G164612 No alias suppressor of npr1-1 constitutive 4 0.05 Orthogroups_2024-Update
GRMZM2G406601 No alias lectin protein kinase family protein 0.04 Orthogroups_2024-Update
GRMZM2G448672 No alias suppressor of npr1-1 constitutive 4 0.04 Orthogroups_2024-Update
GRMZM2G451147 No alias suppressor of npr1-1 constitutive 4 0.05 Orthogroups_2024-Update
GRMZM5G825193 No alias Protein kinase superfamily protein 0.02 Orthogroups_2024-Update
Glyma.07G094500 No alias Protein kinase superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G095000 No alias Protein kinase superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G095100 No alias receptor serine/threonine kinase, putative 0.02 Orthogroups_2024-Update
Glyma.07G095200 No alias Protein kinase superfamily protein 0.04 Orthogroups_2024-Update
Glyma.09G055750 No alias Protein kinase family protein 0.03 Orthogroups_2024-Update
Glyma.09G056000 No alias S-domain-2 5 0.02 Orthogroups_2024-Update
Glyma.09G181960 No alias Protein kinase superfamily protein 0.04 Orthogroups_2024-Update
Glyma.09G182200 No alias suppressor of npr1-1 constitutive 4 0.04 Orthogroups_2024-Update
Glyma.13G032600 No alias Protein kinase superfamily protein 0.05 Orthogroups_2024-Update
Glyma.13G033200 No alias Protein kinase superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G033400 No alias Protein kinase superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G079100 No alias PR5-like receptor kinase 0.03 Orthogroups_2024-Update
Glyma.14G118700 No alias Protein kinase superfamily protein 0.02 Orthogroups_2024-Update
Glyma.15G162000 No alias lectin protein kinase family protein 0.03 Orthogroups_2024-Update
Glyma.17G214100 No alias Protein kinase superfamily protein 0.05 Orthogroups_2024-Update
Glyma.17G214200 No alias Protein kinase superfamily protein 0.03 Orthogroups_2024-Update
Glyma.17G214600 No alias Protein kinase superfamily protein 0.03 Orthogroups_2024-Update
Glyma.17G214700 No alias Protein kinase superfamily protein 0.05 Orthogroups_2024-Update
Glyma.18G294400 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 5 0.02 Orthogroups_2024-Update
Glyma.20G118700 No alias Protein kinase superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G118900 No alias receptor serine/threonine kinase, putative 0.03 Orthogroups_2024-Update
HORVU2Hr1G017910.1 No alias RLCK-Os receptor-like protein kinase & EC_2.7... 0.03 Orthogroups_2024-Update
HORVU3Hr1G007920.11 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
HORVU6Hr1G074690.1 No alias RLCK-Os receptor-like protein kinase & EC_2.7... 0.03 Orthogroups_2024-Update
HORVU6Hr1G095260.1 No alias RLCK-Os receptor-like protein kinase & EC_2.7... 0.03 Orthogroups_2024-Update
LOC_Os01g02770 No alias resistance-related receptor-like kinase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g04460 No alias Ser/Thr protein kinase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g04490 No alias Ser/Thr protein kinase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g24770 No alias protein kinase, putative, expressed 0.02 Orthogroups_2024-Update
MA_10296064g0010 No alias (at1g66980 : 275.0) Encodes SNC4 (suppressor of npr1-1,... 0.1 Orthogroups_2024-Update
MA_10427140g0010 No alias (at1g66920 : 292.0) Protein kinase superfamily protein;... 0.03 Orthogroups_2024-Update
MA_10427613g0020 No alias (at5g38240 : 107.0) Protein kinase family protein;... 0.05 Orthogroups_2024-Update
MA_10435592g0010 No alias (at5g38280 : 217.0) putative receptor serine/threonine... 0.03 Orthogroups_2024-Update
MA_10436344g0010 No alias (at5g24080 : 91.3) Protein kinase superfamily protein;... 0.08 Orthogroups_2024-Update
MA_10436344g0020 No alias (at5g38280 : 117.0) putative receptor serine/threonine... 0.03 Orthogroups_2024-Update
MA_10437273g0010 No alias (at5g24080 : 213.0) Protein kinase superfamily protein;... 0.05 Orthogroups_2024-Update
MA_10437273g0020 No alias (at1g69910 : 80.5) Protein kinase superfamily protein;... 0.06 Orthogroups_2024-Update
MA_115015g0010 No alias (at1g66910 : 206.0) Protein kinase superfamily protein;... 0.07 Orthogroups_2024-Update
MA_149595g0010 No alias (at1g66910 : 290.0) Protein kinase superfamily protein;... 0.04 Orthogroups_2024-Update
MA_163708g0010 No alias (at1g66920 : 255.0) Protein kinase superfamily protein;... 0.07 Orthogroups_2024-Update
MA_163708g0030 No alias no hits & (original description: no original description) 0.12 Orthogroups_2024-Update
MA_180210g0010 No alias (at1g66920 : 230.0) Protein kinase superfamily protein;... 0.03 Orthogroups_2024-Update
MA_18237g0010 No alias no hits & (original description: no original description) 0.1 Orthogroups_2024-Update
MA_209684g0010 No alias no hits & (original description: no original description) 0.11 Orthogroups_2024-Update
MA_241663g0010 No alias (at4g18250 : 242.0) receptor serine/threonine kinase,... 0.04 Orthogroups_2024-Update
MA_28968g0010 No alias (at1g70250 : 164.0) Encodes a Protease inhibitor/seed... 0.04 Orthogroups_2024-Update
MA_30572g0010 No alias no hits & (original description: no original description) 0.12 Orthogroups_2024-Update
MA_35387g0010 No alias no hits & (original description: no original description) 0.08 Orthogroups_2024-Update
MA_420475g0020 No alias (at1g66980 : 254.0) Encodes SNC4 (suppressor of npr1-1,... 0.03 Orthogroups_2024-Update
MA_496667g0010 No alias (at5g38280 : 207.0) putative receptor serine/threonine... 0.05 Orthogroups_2024-Update
MA_49967g0020 No alias (at1g66930 : 238.0) Protein kinase superfamily protein;... 0.05 Orthogroups_2024-Update
MA_69960g0010 No alias (at1g70250 : 104.0) Encodes a Protease inhibitor/seed... 0.05 Orthogroups_2024-Update
MA_77557g0010 No alias (at1g66940 : 81.6) protein kinase-related; FUNCTIONS IN:... 0.06 Orthogroups_2024-Update
MA_87935g0010 No alias (at1g66920 : 267.0) Protein kinase superfamily protein;... 0.03 Orthogroups_2024-Update
MA_92204g0010 No alias (at1g66920 : 269.0) Protein kinase superfamily protein;... 0.04 Orthogroups_2024-Update
MA_951465g0010 No alias (at1g66920 : 297.0) Protein kinase superfamily protein;... 0.05 Orthogroups_2024-Update
PSME_00007012-RA No alias (at1g66920 : 342.0) Protein kinase superfamily protein;... 0.05 Orthogroups_2024-Update
PSME_00013129-RA No alias (at5g38260 : 280.0) Protein kinase superfamily protein;... 0.09 Orthogroups_2024-Update
PSME_00014123-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00018394-RA No alias (at1g66920 : 293.0) Protein kinase superfamily protein;... 0.03 Orthogroups_2024-Update
PSME_00020132-RA No alias (at5g38240 : 100.0) Protein kinase family protein;... 0.04 Orthogroups_2024-Update
PSME_00026928-RA No alias (at5g38260 : 300.0) Protein kinase superfamily protein;... 0.05 Orthogroups_2024-Update
PSME_00029782-RA No alias (at1g66910 : 290.0) Protein kinase superfamily protein;... 0.06 Orthogroups_2024-Update
PSME_00036526-RA No alias (at1g66910 : 311.0) Protein kinase superfamily protein;... 0.02 Orthogroups_2024-Update
PSME_00040735-RA No alias (at1g66920 : 239.0) Protein kinase superfamily protein;... 0.02 Orthogroups_2024-Update
PSME_00043678-RA No alias (at1g66910 : 298.0) Protein kinase superfamily protein;... 0.04 Orthogroups_2024-Update
PSME_00047985-RA No alias (at1g66910 : 310.0) Protein kinase superfamily protein;... 0.05 Orthogroups_2024-Update
PSME_00050243-RA No alias (at5g38280 : 300.0) putative receptor serine/threonine... 0.04 Orthogroups_2024-Update
PSME_00050570-RA No alias (at1g66920 : 251.0) Protein kinase superfamily protein;... 0.11 Orthogroups_2024-Update
PSME_00053132-RA No alias (at1g66920 : 259.0) Protein kinase superfamily protein;... 0.07 Orthogroups_2024-Update
PSME_00055446-RA No alias (at1g66920 : 281.0) Protein kinase superfamily protein;... 0.07 Orthogroups_2024-Update
Potri.007G140800 No alias PR5-like receptor kinase 0.04 Orthogroups_2024-Update
Potri.007G141000 No alias PR5-like receptor kinase 0.06 Orthogroups_2024-Update
Potri.010G120950 No alias Protein kinase superfamily protein 0.07 Orthogroups_2024-Update
Potri.012G003000 No alias Protein kinase superfamily protein 0.06 Orthogroups_2024-Update
Potri.012G011400 No alias RING/U-box superfamily protein 0.05 Orthogroups_2024-Update
Potri.017G007966 No alias Protein kinase superfamily protein 0.03 Orthogroups_2024-Update
Potri.017G008100 No alias suppressor of npr1-1 constitutive 4 0.05 Orthogroups_2024-Update
Potri.017G008200 No alias suppressor of npr1-1 constitutive 4 0.07 Orthogroups_2024-Update
Potri.T065400 No alias Protein kinase family protein 0.05 Orthogroups_2024-Update
Seita.2G028800.1 No alias RLCK-Os receptor-like protein kinase & EC_2.7... 0.02 Orthogroups_2024-Update
Seita.3G021400.1 No alias RLCK-Os receptor-like protein kinase & EC_2.7... 0.07 Orthogroups_2024-Update
Seita.5G078000.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.05 Orthogroups_2024-Update
Seita.5G092500.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.06 Orthogroups_2024-Update
Seita.5G203700.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
Seita.5G278200.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.04 Orthogroups_2024-Update
Seita.5G280400.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
Sobic.003G079700.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.06 Orthogroups_2024-Update
Sobic.003G079900.2 No alias EC_2.7 transferase transferring phosphorus-containing group 0.05 Orthogroups_2024-Update
Sobic.003G080000.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.02 Orthogroups_2024-Update
Sobic.003G080100.3 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
Sobic.003G080700.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.04 Orthogroups_2024-Update
Sobic.003G082401.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.04 Orthogroups_2024-Update
Sobic.003G096400.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.02 Orthogroups_2024-Update
Sobic.003G096900.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.04 Orthogroups_2024-Update
Sobic.003G097200.2 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
Sobic.003G192400.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.06 Orthogroups_2024-Update
Sobic.003G263001.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.06 Orthogroups_2024-Update
Sobic.003G263300.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.05 Orthogroups_2024-Update
Sobic.006G028800.1 No alias DUF26 protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Sobic.006G246200.4 No alias RLCK-Os receptor-like protein kinase & EC_2.7... 0.05 Orthogroups_2024-Update
Sobic.006G246300.3 No alias RLCK-Os receptor-like protein kinase & EC_2.7... 0.05 Orthogroups_2024-Update
Sobic.007G032900.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.07 Orthogroups_2024-Update
Solyc01g008500 No alias Receptor-like protein kinase (AHRD V3.3 *** A0A061EYK6_THECC) 0.03 Orthogroups_2024-Update
Solyc03g083480 No alias Membrane receptor-like protein 1 (AHRD V3.3 *** B3TJG2_CAPAN) 0.02 Orthogroups_2024-Update
Sopen02g026120 No alias Protein kinase domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030247 polysaccharide binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0010167 response to nitrate IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0015706 nitrate transport IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
BP GO:1901698 response to nitrogen compound IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR032872 WAK_assoc_C 207 284
IPR025287 WAK_GUB 89 160
No external refs found!