Sopen05g018730


Description : Reverse transcriptase (RNA-dependent DNA polymerase)


Gene families : OG_42_0002213 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002213_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g018730
Cluster HCCA clusters: Cluster_398

Target Alias Description ECC score Gene Family Method Actions
Sopen07g009610 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
BP GO:0015074 DNA integration IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013103 RVT_2 633 873
IPR001584 Integrase_cat-core 353 427
IPR001878 Znf_CCHC 272 286
No external refs found!