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  5. PSME_00002536-RA

PSME_00002536-RA


Description : (at1g30360 : 745.0) early-responsive to dehydration 4 (ERD4); INVOLVED IN: response to water deprivation; LOCATED IN: plasma membrane, chloroplast, vacuole, membrane, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT4G02900.1); Has 1361 Blast hits to 1266 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 183; Fungi - 651; Plants - 396; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (reliability: 1490.0) & (original description: no original description)


Gene families : OG_42_0000192 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000192_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00002536-RA
Cluster HCCA clusters: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
A4A49_09861 No alias csc1-like protein rxw8 0.02 Orthogroups_2024-Update
Bradi2g26180 No alias ERD (early-responsive to dehydration stress) family protein 0.03 Orthogroups_2024-Update
Brara.A02367.1 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
Cre08.g360564 No alias ERD (early-responsive to dehydration stress) family protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G051200.12 No alias calcium-permeable channel *(OSCA) 0.02 Orthogroups_2024-Update
HORVU2Hr1G060390.2 No alias calcium-permeable channel *(OSCA) 0.02 Orthogroups_2024-Update
HORVU2Hr1G063620.3 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
Kfl00551_0040 kfl00551_0040_v1.1 (at1g30360 : 449.0) early-responsive to dehydration 4... 0.01 Orthogroups_2024-Update
LOC_Os05g32720 No alias early-responsive to dehydration protein-related,... 0.02 Orthogroups_2024-Update
MA_10435227g0010 No alias (at4g02900 : 534.0) ERD (early-responsive to dehydration... 0.03 Orthogroups_2024-Update
Pp1s13_374V6 No alias early-responsive to dehydration erd 0.02 Orthogroups_2024-Update
Pp1s213_49V6 No alias early responsive to dehydration protein 0.02 Orthogroups_2024-Update
evm.model.tig00000227.25 No alias (at1g30360 : 154.0) early-responsive to dehydration 4... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
InterPro domains Description Start Stop
IPR027815 PHM7_cyt 187 354
IPR003864 RSN1_7TM 367 636
IPR032880 Csc1_N 6 165
No external refs found!