PSME_00002540-RA

Description : (at5g49660 : 753.0) Leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT1G09970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93194|rpk1_iponi : 483.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 1506.0) & (original description: no original description)

Gene families : OG_42_0000035 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00002540-RA
Cluster	HCCA clusters: Cluster_81

Target	Alias	Description	ECC score	Gene Family Method
165220	No alias	HAESA-like 1	0.03	Orthogroups_2024-Update
171048	No alias	HAESA-like 1	0.02	Orthogroups_2024-Update
90370	No alias	Leucine-rich receptor-like protein kinase family protein	0.03	Orthogroups_2024-Update
A4A49_00761	No alias	receptor-like protein kinase 5	0.02	Orthogroups_2024-Update
A4A49_05403	No alias	leucine-rich repeat receptor-like protein kinase tdr	0.02	Orthogroups_2024-Update
A4A49_36127	No alias	putative leucine-rich repeat receptor-like protein kinase	0.02	Orthogroups_2024-Update
At1g28440	No alias	Receptor-like protein kinase HSL1...	0.02	Orthogroups_2024-Update
At4g20140	No alias	LRR receptor-like serine/threonine-protein kinase GSO1...	0.02	Orthogroups_2024-Update
Bradi1g37960	No alias	Protein kinase family protein with leucine-rich repeat domain	0.04	Orthogroups_2024-Update
Bradi2g19380	No alias	Protein kinase family protein with leucine-rich repeat domain	0.02	Orthogroups_2024-Update
Bradi2g56750	No alias	Leucine-rich receptor-like protein kinase family protein	0.02	Orthogroups_2024-Update
Bradi3g08660	No alias	Protein kinase family protein with leucine-rich repeat domain	0.02	Orthogroups_2024-Update
Bradi4g21836	No alias	Leucine-rich receptor-like protein kinase family protein	0.03	Orthogroups_2024-Update
Brara.I02941.1	No alias	LRR-XI protein kinase & IDA/IDL-peptide receptor kinase...	0.02	Orthogroups_2024-Update
GRMZM2G070520	No alias	HAESA-like 1	0.01	Orthogroups_2024-Update
GRMZM2G112309	No alias	Protein kinase family protein with leucine-rich repeat domain	0.03	Orthogroups_2024-Update
GRMZM2G132212	No alias	Protein kinase family protein with leucine-rich repeat domain	0.02	Orthogroups_2024-Update
GRMZM2G177883	No alias	Protein kinase family protein with leucine-rich repeat domain	0.03	Orthogroups_2024-Update
GRMZM2G313643	No alias	Leucine-rich repeat transmembrane protein kinase	0.03	Orthogroups_2024-Update
GRMZM2G391794	No alias	Leucine-rich receptor-like protein kinase family protein	0.02	Orthogroups_2024-Update
Glyma.03G165700	No alias	Leucine-rich repeat receptor-like protein kinase family protein	0.02	Orthogroups_2024-Update
Glyma.06G090800	No alias	Leucine-rich receptor-like protein kinase family protein	0.03	Orthogroups_2024-Update
Glyma.08G357400	No alias	Leucine-rich repeat transmembrane protein kinase family protein	0.02	Orthogroups_2024-Update
Glyma.09G230300	No alias	Leucine-rich repeat protein kinase family protein	0.03	Orthogroups_2024-Update
Glyma.10G195700	No alias	PEP1 receptor 1	0.03	Orthogroups_2024-Update
Glyma.10G220700	No alias	Leucine-rich receptor-like protein kinase family protein	0.03	Orthogroups_2024-Update
Glyma.13G253300	No alias	Leucine-rich receptor-like protein kinase family protein	0.05	Orthogroups_2024-Update
Glyma.13G294100	No alias	HAESA-like 1	0.02	Orthogroups_2024-Update
Kfl00724_0030	kfl00724_0030_v1....	(at1g56120 : 222.0) Leucine-rich repeat transmembrane...	0.01	Orthogroups_2024-Update
LOC_Os02g13430	No alias	receptor-like protein kinase 5 precursor, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os05g44770	No alias	receptor-like protein kinase 5 precursor, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os06g36270	No alias	receptor-like protein kinase 5 precursor, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os10g06760	No alias	receptor-like protein kinase precursor, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os12g43640	No alias	receptor-like protein kinase HAIKU2 precursor, putative,...	0.02	Orthogroups_2024-Update
MA_10437164g0020	No alias	(at5g49660 : 385.0) Leucine-rich repeat transmembrane...	0.03	Orthogroups_2024-Update
MA_181770g0010	No alias	(at5g49660 : 775.0) Leucine-rich repeat transmembrane...	0.03	Orthogroups_2024-Update
Mp1g23000.1	No alias	Leucine-rich repeat receptor-like...	0.02	Orthogroups_2024-Update
PSME_00013247-RA	No alias	(at1g09970 : 813.0) RLK7 belongs to a leucine-rich...	0.05	Orthogroups_2024-Update
PSME_00045903-RA	No alias	(at1g28440 : 766.0) HAESA-like 1 (HSL1); FUNCTIONS IN:...	0.04	Orthogroups_2024-Update
Potri.002G070900	No alias	Leucine-rich repeat transmembrane protein kinase family protein	0.03	Orthogroups_2024-Update
Potri.003G156200	No alias	Leucine-rich repeat transmembrane protein kinase	0.02	Orthogroups_2024-Update
Seita.5G313500.1	No alias	LRR-XV protein kinase & SCREW peptide receptor *(NUT) &...	0.02	Orthogroups_2024-Update
Sobic.001G224000.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
Sobic.004G028600.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.04	Orthogroups_2024-Update
Sobic.008G060200.1	No alias	SCREW peptide receptor *(NUT) & EC_2.7 transferase...	0.04	Orthogroups_2024-Update
Sobic.010G177300.1	No alias	LRR-XI protein kinase & RGF-peptide receptor *(RGFR) &...	0.02	Orthogroups_2024-Update
Solyc04g076990	No alias	Receptor protein kinase CLAVATA1, putative (AHRD V3.3...	0.03	Orthogroups_2024-Update
Solyc07g053600	No alias	Receptor-like protein kinase HSL1 (AHRD V3.3 *** HSL1_ARATH)	0.02	Orthogroups_2024-Update
Sopen02g022530	No alias	Protein kinase domain	0.03	Orthogroups_2024-Update
Sopen03g024120	No alias	Protein kinase domain	0.03	Orthogroups_2024-Update
Sopen07g027550	No alias	Protein kinase domain	0.03	Orthogroups_2024-Update
Sopen11g021050	No alias	Protein kinase domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	InterProScan predictions
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Predicted GO
MF	GO:0004525	ribonuclease III activity	IEP	Predicted GO
MF	GO:0004556	alpha-amylase activity	IEP	Predicted GO
MF	GO:0004857	enzyme inhibitor activity	IEP	Predicted GO
MF	GO:0005215	transporter activity	IEP	Predicted GO
MF	GO:0005509	calcium ion binding	IEP	Predicted GO
BP	GO:0006284	base-excision repair	IEP	Predicted GO
BP	GO:0006810	transport	IEP	Predicted GO
CC	GO:0016020	membrane	IEP	Predicted GO
MF	GO:0019208	phosphatase regulator activity	IEP	Predicted GO
MF	GO:0019211	phosphatase activator activity	IEP	Predicted GO
MF	GO:0022857	transmembrane transporter activity	IEP	Predicted GO
MF	GO:0030234	enzyme regulator activity	IEP	Predicted GO
MF	GO:0030246	carbohydrate binding	IEP	Predicted GO
MF	GO:0030599	pectinesterase activity	IEP	Predicted GO
MF	GO:0032296	double-stranded RNA-specific ribonuclease activity	IEP	Predicted GO
BP	GO:0042545	cell wall modification	IEP	Predicted GO
BP	GO:0045229	external encapsulating structure organization	IEP	Predicted GO
BP	GO:0051179	localization	IEP	Predicted GO
BP	GO:0051234	establishment of localization	IEP	Predicted GO
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Predicted GO
BP	GO:0055085	transmembrane transport	IEP	Predicted GO
BP	GO:0071554	cell wall organization or biogenesis	IEP	Predicted GO
BP	GO:0071555	cell wall organization	IEP	Predicted GO
MF	GO:0098772	molecular function regulator	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001611	Leu-rich_rpt	534	555
IPR013210	LRR_N_plant-typ	34	73
IPR000719	Prot_kinase_dom	673	946

External Links

No external refs found!

PSME_00002540-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation