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  5. PSME_00002642-RA

PSME_00002642-RA


Description : (at3g11430 : 550.0) Encodes a protein with glycerol-3-phosphate acyltransferase activity, involved in the biosynthesis of suberin polyester.; glycerol-3-phosphate acyltransferase 5 (GPAT5); CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 7 (TAIR:AT5G06090.1); Has 397 Blast hits to 386 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 0; Plants - 368; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 1100.0) & (original description: no original description)


Gene families : OG_42_0000554 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000554_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00002642-RA
Cluster HCCA clusters: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
170163 No alias glycerol-3-phosphate acyltransferase 6 0.03 Orthogroups_2024-Update
80614 No alias glycerol-3-phosphate acyltransferase 6 0.03 Orthogroups_2024-Update
A4A49_30297 No alias glycerol-3-phosphate 2-o-acyltransferase 6 0.03 Orthogroups_2024-Update
At3g11430 No alias Glycerol-3-phosphate acyltransferase 5... 0.03 Orthogroups_2024-Update
Bradi1g73935 No alias glycerol-3-phosphate acyltransferase 6 0.05 Orthogroups_2024-Update
Bradi2g55290 No alias glycerol-3-phosphate acyltransferase 6 0.03 Orthogroups_2024-Update
Bradi3g26655 No alias glycerol-3-phosphate acyltransferase 6 0.03 Orthogroups_2024-Update
Glyma.14G028300 No alias glycerol-3-phosphate acyltransferase 1 0.04 Orthogroups_2024-Update
HORVU4Hr1G074470.7 No alias glycerol-3-phosphate acyl transferase *(RAM2) &... 0.02 Orthogroups_2024-Update
LOC_Os01g63580 No alias glycerol-3-phosphate acyltransferase, putative, expressed 0.04 Orthogroups_2024-Update
MA_10434609g0020 No alias (at3g11430 : 258.0) Encodes a protein with... 0.03 Orthogroups_2024-Update
MA_185125g0010 No alias (at2g38110 : 502.0) Encodes a protein with... 0.03 Orthogroups_2024-Update
MA_75104g0010 No alias (at2g38110 : 508.0) Encodes a protein with... 0.04 Orthogroups_2024-Update
Potri.016G063900 No alias glycerol-3-phosphate acyltransferase 6 0.05 Orthogroups_2024-Update
Potri.016G113100 No alias glycerol-3-phosphate acyltransferase 6 0.04 Orthogroups_2024-Update
Pp1s117_125V6 No alias er glycerol-phosphate acyltransferase 0.02 Orthogroups_2024-Update
Pp1s281_69V6 No alias er glycerol-phosphate acyltransferase 0.02 Orthogroups_2024-Update
Pp1s42_150V6 No alias er glycerol-phosphate acyltransferase 0.03 Orthogroups_2024-Update
Pp1s9_453V6 No alias F16M14.4; phospholipid/glycerol acyltransferase family... 0.03 Orthogroups_2024-Update
Sobic.001G250200.1 No alias glycerol-3-phosphate acyl transferase *(RAM2) &... 0.02 Orthogroups_2024-Update
Solyc09g014350 No alias Glycerol-3-phosphate acyltransferase (AHRD V3.3 *** G7L6J6_MEDTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016746 transferase activity, transferring acyl groups IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002123 Plipid/glycerol_acylTrfase 326 430
No external refs found!