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  5. PSME_00002726-RA

PSME_00002726-RA


Description : (at2g38820 : 156.0) Protein of unknown function (DUF506) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT3G22970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 312.0) & (original description: no original description)


Gene families : OG_42_0000147 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000147_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00002726-RA
Cluster HCCA clusters: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
Brara.K00029.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Cre09.g403150 No alias Protein of unknown function (DUF506) 0.02 Orthogroups_2024-Update
Cre16.g694203 No alias Protein of unknown function (DUF506) 0.02 Orthogroups_2024-Update
GRMZM2G030350 No alias Protein of unknown function (DUF506) 0.03 Orthogroups_2024-Update
Glyma.01G231800 No alias Protein of unknown function (DUF506) 0.04 Orthogroups_2024-Update
Glyma.10G179100 No alias Protein of unknown function (DUF506) 0.03 Orthogroups_2024-Update
LOC_Os05g44300 No alias plant-specific domain TIGR01615 family protein, expressed 0.02 Orthogroups_2024-Update
MA_18474g0010 No alias (at2g39650 : 141.0) Protein of unknown function (DUF506)... 0.04 Orthogroups_2024-Update
MA_9190749g0010 No alias (at3g22970 : 133.0) Protein of unknown function (DUF506)... 0.04 Orthogroups_2024-Update
PSME_00027988-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
Potri.004G001400 No alias Protein of unknown function (DUF506) 0.05 Orthogroups_2024-Update
Potri.004G044300 No alias Protein of unknown function (DUF506) 0.02 Orthogroups_2024-Update
Potri.011G023300 No alias Protein of unknown function (DUF506) 0.04 Orthogroups_2024-Update
Potri.011G053300 No alias Protein of unknown function (DUF506) 0.04 Orthogroups_2024-Update
Potri.019G074400 No alias Protein of unknown function (DUF506) 0.02 Orthogroups_2024-Update
Potri.T157800 No alias Protein of unknown function (DUF506) 0.04 Orthogroups_2024-Update
Seita.9G055800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G400200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc06g083160 No alias LOW QUALITY:DUF506 family protein (AHRD V3.3 *** G7LF52_MEDTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
BP GO:0051260 protein homooligomerization IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 33 246
No external refs found!