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  5. PSME_00002739-RA

PSME_00002739-RA


Description : (at5g19590 : 119.0) Protein of unknown function, DUF538; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT4G02360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 238.0) & (original description: no original description)


Gene families : OG_42_0000796 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000796_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Pseudotsuga release: PSME_00002739-RA
Cluster HCCA clusters: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
Glyma.10G017400 No alias Protein of unknown function, DUF538 0.03 Orthogroups_2024-Update
LOC_Os01g41220 No alias DUF538 domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
Potri.014G127500 No alias Protein of unknown function, DUF538 0.02 Orthogroups_2024-Update
Sopen09g030050 No alias Protein of unknown function, DUF538 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008037 cell recognition IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
InterPro domains Description Start Stop
IPR007493 DUF538 36 132
No external refs found!