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  5. PSME_00003016-RA

PSME_00003016-RA


Description : (at1g72200 : 114.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G22500.1); Has 9343 Blast hits to 9316 proteins in 282 species: Archae - 0; Bacteria - 4; Metazoa - 2295; Fungi - 806; Plants - 4899; Viruses - 51; Other Eukaryotes - 1288 (source: NCBI BLink). & (q9lrb7|el5_orysa : 83.2) E3 ubiquitin-protein ligase EL5 (EC 6.3.2.-) - Oryza sativa (Rice) & (reliability: 228.0) & (original description: no original description)


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00003016-RA
Cluster HCCA clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
A4A49_08432 No alias ring-h2 finger protein atl70 0.03 Orthogroups_2024-Update
A4A49_10724 No alias ring-h2 finger protein atl33 0.02 Orthogroups_2024-Update
A4A49_11165 No alias ring-h2 finger protein atl8 0.05 Orthogroups_2024-Update
A4A49_18116 No alias ring-h2 finger protein atl78 0.04 Orthogroups_2024-Update
A4A49_18667 No alias ring-h2 finger protein atl18 0.02 Orthogroups_2024-Update
A4A49_21361 No alias ring-h2 finger protein atl78 0.04 Orthogroups_2024-Update
A4A49_30512 No alias ring-h2 finger protein atl54 0.03 Orthogroups_2024-Update
A4A49_36505 No alias e3 ubiquitin-protein ligase atl6 0.05 Orthogroups_2024-Update
A4A49_40065 No alias ring-h2 finger protein atl70 0.02 Orthogroups_2024-Update
A4A49_59878 No alias ring-h2 finger protein atl60 0.02 Orthogroups_2024-Update
At1g49200 No alias RING-H2 finger protein ATL75... 0.03 Orthogroups_2024-Update
At2g17450 No alias Probable E3 ubiquitin-protein ligase ATL44... 0.05 Orthogroups_2024-Update
At2g42350 No alias RING-H2 finger protein ATL40... 0.03 Orthogroups_2024-Update
At3g10910 No alias RING-H2 finger protein ATL72... 0.03 Orthogroups_2024-Update
At3g19140 No alias Putative RING-H2 finger protein ATL62... 0.04 Orthogroups_2024-Update
At3g62690 No alias RING-H2 zinc finger protein ATL5... 0.03 Orthogroups_2024-Update
At5g05280 No alias RING-H2 finger protein ATL73... 0.04 Orthogroups_2024-Update
At5g41450 No alias RING/U-box superfamily protein... 0.02 Orthogroups_2024-Update
At5g47610 No alias At5g47610 [Source:UniProtKB/TrEMBL;Acc:Q1H5E6] 0.02 Orthogroups_2024-Update
Bradi1g29611 No alias RING-H2 finger A3A 0.03 Orthogroups_2024-Update
Bradi1g32080 No alias RING-H2 finger A3A 0.02 Orthogroups_2024-Update
Bradi1g45727 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Bradi1g46750 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Bradi1g60390 No alias hypoxia-responsive family protein / zinc finger... 0.07 Orthogroups_2024-Update
Bradi2g22650 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Bradi3g09395 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Bradi3g46030 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Bradi4g13960 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Bradi4g25745 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Bradi4g32634 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Bradi4g44454 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.03 Orthogroups_2024-Update
Bradi5g19960 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Brara.A03044.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.A03045.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.B00007.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Brara.B00209.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.B02007.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.B02021.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.B03540.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Brara.C01887.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.C03025.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.C03353.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.D02285.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.E00161.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Brara.E00282.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.E02690.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.E02957.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.F01484.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.F02864.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.G01336.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.06 Orthogroups_2024-Update
Brara.H00897.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.H01648.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Brara.H01760.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.08 Orthogroups_2024-Update
Brara.I00473.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
GRMZM2G004519 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G015409 No alias RING/U-box superfamily protein 0.05 Orthogroups_2024-Update
GRMZM2G021796 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G029623 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G171277 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G409372 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G478553 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.04G098100 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.04G222300 No alias RING/U-box superfamily protein 0.05 Orthogroups_2024-Update
Glyma.06G015200 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.08G070100 No alias RING/U-box superfamily protein 0.05 Orthogroups_2024-Update
Glyma.08G271100 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G042400 No alias TOXICOS EN LEVADURA 2 0.03 Orthogroups_2024-Update
Glyma.09G067900 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.10G289100 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G242500 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G242800 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.12G047300 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.13G042300 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.13G170300 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.14G195900 No alias TOXICOS EN LEVADURA 2 0.03 Orthogroups_2024-Update
Glyma.15G173800 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.16G030900 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.18G025700 No alias RING/U-box superfamily protein 0.05 Orthogroups_2024-Update
Glyma.18G239400 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
HORVU0Hr1G021450.9 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G028310.1 No alias Unknown function 0.06 Orthogroups_2024-Update
HORVU4Hr1G025400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
HORVU5Hr1G082840.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G087960.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU5Hr1G096480.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU5Hr1G121280.7 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
HORVU6Hr1G011010.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU6Hr1G091610.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
HORVU7Hr1G036380.2 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU7Hr1G080020.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
LOC_Os01g11500 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g61470 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g08200 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g33720 No alias RING-H2 finger protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g35144 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.04 Orthogroups_2024-Update
LOC_Os02g35329 No alias RING-H2 finger protein ATL3F, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g37740 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.05 Orthogroups_2024-Update
LOC_Os04g48310 No alias RING-H2 finger protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g36310 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g39260 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g09310 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g16060 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g34870 No alias Zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g42610 No alias RING finger protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g37760 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g01750 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g40460 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_10431388g0020 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_10436208g0010 No alias (at1g72200 : 100.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_10436650g0010 No alias (at1g72310 : 126.0) Encodes a putative RING-H2 zinc... 0.05 Orthogroups_2024-Update
MA_107765g0010 No alias (at1g72200 : 140.0) RING/U-box superfamily protein;... 0.04 Orthogroups_2024-Update
MA_114175g0010 No alias (at3g16720 : 124.0) RING-H2 protein induced after... 0.04 Orthogroups_2024-Update
MA_1143g0010 No alias (at1g49230 : 105.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_12352g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_124750g0010 No alias (at5g01880 : 92.8) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_1252g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_26001g0020 No alias (at1g72310 : 117.0) Encodes a putative RING-H2 zinc... 0.04 Orthogroups_2024-Update
MA_308999g0010 No alias (at1g72310 : 80.9) Encodes a putative RING-H2 zinc... 0.04 Orthogroups_2024-Update
MA_38494g0010 No alias (at1g49230 : 119.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_44828g0020 No alias (at3g62690 : 89.0) Encodes a RING-H2 zinc finger protein... 0.04 Orthogroups_2024-Update
MA_5319g0010 No alias (at1g49230 : 120.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_611616g0010 No alias (at1g49230 : 125.0) RING/U-box superfamily protein;... 0.04 Orthogroups_2024-Update
MA_634100g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_6697g0010 No alias (at1g72310 : 120.0) Encodes a putative RING-H2 zinc... 0.03 Orthogroups_2024-Update
MA_6931619g0010 No alias (at1g49230 : 106.0) RING/U-box superfamily protein;... 0.04 Orthogroups_2024-Update
MA_77628g0010 No alias (at1g72310 : 116.0) Encodes a putative RING-H2 zinc... 0.03 Orthogroups_2024-Update
MA_786911g0010 No alias (at1g53820 : 92.8) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_80729g0030 No alias (at3g16720 : 139.0) RING-H2 protein induced after... 0.03 Orthogroups_2024-Update
MA_904294g0010 No alias (at1g72310 : 107.0) Encodes a putative RING-H2 zinc... 0.04 Orthogroups_2024-Update
MA_9143538g0010 No alias no hits & (original description: no original description) 0.06 Orthogroups_2024-Update
MA_94359g0010 No alias (at4g35480 : 121.0) Encodes a putative RING-H2 finger... 0.05 Orthogroups_2024-Update
Mp3g00390.1 No alias RING-H2-class E3 ligase 0.02 Orthogroups_2024-Update
PSME_00003018-RA No alias (at1g72200 : 115.0) RING/U-box superfamily protein;... 0.04 Orthogroups_2024-Update
PSME_00034763-RA No alias (at5g05280 : 85.1) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
Potri.001G162000 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.001G400600 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.003G073300 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.003G075200 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.005G036800 No alias RING/U-box superfamily protein 0.05 Orthogroups_2024-Update
Potri.005G255200 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.006G144200 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.007G057300 No alias RING-H2 finger A3A 0.03 Orthogroups_2024-Update
Potri.008G018900 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.008G219200 No alias TOXICOS EN LEVADURA 2 0.04 Orthogroups_2024-Update
Potri.010G010500 No alias TOXICOS EN LEVADURA 2 0.03 Orthogroups_2024-Update
Potri.010G206300 No alias TOXICOS EN LEVADURA 2 0.02 Orthogroups_2024-Update
Potri.011G063100 No alias RING/U-box superfamily protein 0.05 Orthogroups_2024-Update
Potri.012G003900 No alias RING/U-box superfamily protein 0.05 Orthogroups_2024-Update
Potri.013G073500 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.017G049300 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Pp1s185_21V6 No alias zinc finger (c3hc4-type ring finger) family protein 0.03 Orthogroups_2024-Update
Pp1s20_280V6 No alias ring finger 0.03 Orthogroups_2024-Update
Seita.1G017900.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Seita.1G197500.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.06 Orthogroups_2024-Update
Seita.1G197600.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.06 Orthogroups_2024-Update
Seita.1G203900.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Seita.2G087800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.2G238400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.08 Orthogroups_2024-Update
Seita.2G390800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.3G074900.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Seita.4G042500.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.4G172100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.4G173000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Seita.5G023000.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Seita.5G148800.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.7G095300.1 No alias regulatory ubiquitin-protein ligase *(PRU2) &... 0.05 Orthogroups_2024-Update
Seita.7G205000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.9G336200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G410900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.001G378600.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.002G232800.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Sobic.003G147301.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Sobic.003G339400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G109600.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Sobic.004G114200.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Sobic.004G181200.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Sobic.004G181300.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.09 Orthogroups_2024-Update
Sobic.004G181400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.07 Orthogroups_2024-Update
Sobic.004G187600.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Sobic.004G187800.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.07 Orthogroups_2024-Update
Sobic.004G251100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G301300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G305000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.006G092200.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Sobic.006G100200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.009G110400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.009G168900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.009G205400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.06 Orthogroups_2024-Update
Sobic.010G071000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.07 Orthogroups_2024-Update
Sobic.010G157300.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.010G157500.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.010G231400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g105620 No alias RING/U-box superfamily protein, putative (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update
Solyc06g064440 No alias RING/U-box superfamily protein, putative (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update
Solyc08g076830 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update
Solyc11g006450 No alias RING/U-box superfamily protein (AHRD V3.3 *** A0A061FQW5_THECC) 0.04 Orthogroups_2024-Update
Solyc12g087860 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update
Sopen03g031440 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen03g034470 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen05g033830 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen06g017190 No alias Ring finger domain 0.04 Orthogroups_2024-Update
Sopen07g027380 No alias Ring finger domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 109 152
No external refs found!