PSME_00003034-RA

Description : (at1g70520 : 315.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 2 (CRK2); FUNCTIONS IN: kinase activity; INVOLVED IN: response to ozone; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (TAIR:AT5G40380.1); Has 123193 Blast hits to 121713 proteins in 4855 species: Archae - 110; Bacteria - 13886; Metazoa - 45515; Fungi - 10581; Plants - 34413; Viruses - 473; Other Eukaryotes - 18215 (source: NCBI BLink). & (q8l4h4|nork_medtr : 185.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 572.0) & (original description: no original description)

Gene families : OG_42_0000508 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000508_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00003034-RA
Cluster	HCCA clusters: Cluster_114

Target	Alias	Description	ECC score	Gene Family Method
Brara.G02978.1	No alias	DUF26 protein kinase & EC_2.7 transferase transferring...	0.02	Orthogroups_2024-Update
Glyma.02G037200	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 3	0.02	Orthogroups_2024-Update
Glyma.17G088000	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 42	0.03	Orthogroups_2024-Update
Glyma.18G141700	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 3	0.03	Orthogroups_2024-Update
LOC_Os05g03920	No alias	TKL_IRAK_DUF26-lf.3 - DUF26 kinases have homology to...	0.03	Orthogroups_2024-Update
MA_10425981g0010	No alias	(at3g22060 : 102.0) contains Pfam profile: PF01657...	0.04	Orthogroups_2024-Update
MA_10437203g0010	No alias	(at1g70520 : 417.0) Encodes a cysteine-rich...	0.03	Orthogroups_2024-Update
MA_10437203g0020	No alias	(at5g40380 : 323.0) Encodes a cysteine-rich...	0.03	Orthogroups_2024-Update
MA_8305243g0010	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
PSME_00000827-RA	No alias	(at5g40380 : 313.0) Encodes a cysteine-rich...	0.03	Orthogroups_2024-Update
PSME_00003037-RA	No alias	(at1g70520 : 407.0) Encodes a cysteine-rich...	0.04	Orthogroups_2024-Update
PSME_00010360-RA	No alias	(at1g70520 : 370.0) Encodes a cysteine-rich...	0.04	Orthogroups_2024-Update
PSME_00016668-RA	No alias	(at1g70520 : 261.0) Encodes a cysteine-rich...	0.04	Orthogroups_2024-Update
PSME_00022260-RA	No alias	(at1g70520 : 384.0) Encodes a cysteine-rich...	0.04	Orthogroups_2024-Update
PSME_00025014-RA	No alias	(at5g40380 : 411.0) Encodes a cysteine-rich...	0.03	Orthogroups_2024-Update
Seita.3G050700.1	No alias	DUF26 protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
Sobic.003G188100.2	No alias	DUF26 protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
Solyc01g007970	No alias	Kinase family protein (AHRD V3.3 *** U5G1A9_POPTR)	0.02	Orthogroups_2024-Update
Sopen01g003520	No alias	Protein kinase domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	InterProScan predictions
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Predicted GO
MF	GO:0004014	adenosylmethionine decarboxylase activity	IEP	Predicted GO
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Predicted GO
BP	GO:0006576	cellular biogenic amine metabolic process	IEP	Predicted GO
BP	GO:0006595	polyamine metabolic process	IEP	Predicted GO
BP	GO:0006596	polyamine biosynthetic process	IEP	Predicted GO
BP	GO:0006597	spermine biosynthetic process	IEP	Predicted GO
BP	GO:0008215	spermine metabolic process	IEP	Predicted GO
BP	GO:0008216	spermidine metabolic process	IEP	Predicted GO
BP	GO:0008295	spermidine biosynthetic process	IEP	Predicted GO
BP	GO:0009309	amine biosynthetic process	IEP	Predicted GO
BP	GO:0009889	regulation of biosynthetic process	IEP	Predicted GO
BP	GO:0010468	regulation of gene expression	IEP	Predicted GO
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:0010629	negative regulation of gene expression	IEP	Predicted GO
BP	GO:0016458	gene silencing	IEP	Predicted GO
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0019222	regulation of metabolic process	IEP	Predicted GO
MF	GO:0030246	carbohydrate binding	IEP	Predicted GO
MF	GO:0030554	adenyl nucleotide binding	IEP	Predicted GO
BP	GO:0031047	gene silencing by RNA	IEP	Predicted GO
BP	GO:0031323	regulation of cellular metabolic process	IEP	Predicted GO
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Predicted GO
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Predicted GO
BP	GO:0042401	cellular biogenic amine biosynthetic process	IEP	Predicted GO
BP	GO:0044106	cellular amine metabolic process	IEP	Predicted GO
BP	GO:0050789	regulation of biological process	IEP	Predicted GO
BP	GO:0050794	regulation of cellular process	IEP	Predicted GO
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0051252	regulation of RNA metabolic process	IEP	Predicted GO
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Predicted GO
BP	GO:0065007	biological regulation	IEP	Predicted GO
BP	GO:0080090	regulation of primary metabolic process	IEP	Predicted GO
BP	GO:0097164	ammonium ion metabolic process	IEP	Predicted GO
MF	GO:0140110	transcription regulator activity	IEP	Predicted GO
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Predicted GO
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001245	Ser-Thr/Tyr_kinase_cat_dom	345	528

External Links

No external refs found!

PSME_00003034-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation