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Description : (at3g09510 : 81.3) Ribonuclease H-like superfamily protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), RNA-directed DNA polymerase (reverse transcriptase), related (InterPro:IPR015706); BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT2G02650.1); Has 1469 Blast hits to 1446 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1468; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 162.6) & (original description: no original description)
Gene families : OG_42_0000662 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000662_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Pseudotsuga release: PSME_00003057-RA | |
| Cluster | HCCA clusters: Cluster_318 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| PSME_00000199-RA | No alias | no hits & (original description: no original description) | 0.04 | Orthogroups_2024-Update | |
| PSME_00005539-RA | No alias | no hits & (original description: no original description) | 0.01 | Orthogroups_2024-Update | |
| PSME_00006087-RA | No alias | no hits & (original description: no original description) | 0.01 | Orthogroups_2024-Update | |
| PSME_00011615-RA | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update | |
| PSME_00012027-RA | No alias | no hits & (original description: no original description) | 0.01 | Orthogroups_2024-Update | |
| PSME_00014612-RA | No alias | no hits & (original description: no original description) | 0.01 | Orthogroups_2024-Update | |
| PSME_00031604-RA | No alias | no hits & (original description: no original description) | 0.01 | Orthogroups_2024-Update | |
| PSME_00040743-RA | No alias | no hits & (original description: no original description) | 0.01 | Orthogroups_2024-Update | |
| PSME_00055940-RA | No alias | no hits & (original description: no original description) | 0.01 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0015405 | P-P-bond-hydrolysis-driven transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0016887 | ATPase activity | IEP | Predicted GO |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0042623 | ATPase activity, coupled | IEP | Predicted GO |
| MF | GO:0042626 | ATPase activity, coupled to transmembrane movement of substances | IEP | Predicted GO |
| MF | GO:0043492 | ATPase activity, coupled to movement of substances | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR026960 | RVT-Znf | 734 | 807 |
| No external refs found! |