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  5. PSME_00003236-RA

PSME_00003236-RA


Description : (p52579|ifrh_tobac : 303.0) Isoflavone reductase homolog A622 (EC 1.3.1.-) - Nicotiana tabacum (Common tobacco) & (at4g39230 : 296.0) encodes a protein whose sequence is similar to phenylcoumaran benzylic ether reductase (PCBER), which catalyzes NADPH-dependent reduction of 8-5' linked lignans such as dehydrodiconiferyl alcohol to give isodihydrodehydrodiconiferyl alcohol.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: phenylcoumaran benzylic ether reductase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 1665 Blast hits to 1661 proteins in 371 species: Archae - 16; Bacteria - 474; Metazoa - 2; Fungi - 521; Plants - 522; Viruses - 3; Other Eukaryotes - 127 (source: NCBI BLink). & (reliability: 592.0) & (original description: no original description)


Gene families : OG_42_0000162 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000162_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00003236-RA
Cluster HCCA clusters: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
A4A49_09977 No alias isoflavone reductase-like a622 0.02 Orthogroups_2024-Update
Brara.E01741.1 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor 0.03 Orthogroups_2024-Update
Brara.I02648.1 No alias pinoresinol/lariciresinol reductase *(PLR) & EC_1.3... 0.02 Orthogroups_2024-Update
Glyma.11G070600 No alias NmrA-like negative transcriptional regulator family protein 0.04 Orthogroups_2024-Update
HORVU3Hr1G032370.4 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor 0.03 Orthogroups_2024-Update
LOC_Os01g01650 No alias isoflavone reductase homolog IRL, putative, expressed 0.02 Orthogroups_2024-Update
MA_10432018g0020 No alias (at1g32100 : 243.0) Encodes a pinoresinol reductase... 0.05 Orthogroups_2024-Update
MA_16892g0010 No alias (at1g75280 : 254.0) isoflavone reductase, putative,... 0.03 Orthogroups_2024-Update
PSME_00049668-RA No alias (at4g39230 : 162.0) encodes a protein whose sequence is... 0.05 Orthogroups_2024-Update
Potri.001G133200 No alias pinoresinol reductase 1 0.03 Orthogroups_2024-Update
Potri.019G078100 No alias NmrA-like negative transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Seita.5G070500.1 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
BP GO:0019684 photosynthesis, light reaction IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR008030 NmrA-like 165 353
IPR008030 NmrA-like 29 143
No external refs found!