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PSME_00003339-RA


Description : (at1g32540 : 154.0) Encodes a protein with 3 plant-specific zinc finger domains that acts as a positive regulator of cell death.; lsd one like 1 (LOL1); FUNCTIONS IN: DNA binding; INVOLVED IN: induction of apoptosis; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LSD1-type (InterPro:IPR005735); BEST Arabidopsis thaliana protein match is: LSD1 zinc finger family protein (TAIR:AT4G20380.7); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 308.0) & (original description: no original description)


Gene families : OG_42_0001639 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001639_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Pseudotsuga release: PSME_00003339-RA

Target Alias Description ECC score Gene Family Method Actions
MA_10436314g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
Pp1s11_54V6 No alias zinc finger protein 0.02 Orthogroups_2024-Update
Solyc02g069720 No alias Zinc finger protein LSD1 (AHRD V3.3 *** F8RP38_PEA) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008289 lipid binding IEP Predicted GO
InterPro domains Description Start Stop
IPR005735 Znf_LSD1 151 175
IPR005735 Znf_LSD1 113 137
IPR005735 Znf_LSD1 75 99
No external refs found!