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  5. PSME_00003380-RA

PSME_00003380-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000049 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000049_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00003380-RA
Cluster HCCA clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Brara.A01868.1 No alias Unknown function 0.03 Orthogroups_2024-Update
PSME_00027624-RA No alias (at1g79740 : 142.0) hAT transposon superfamily;... 0.05 Orthogroups_2024-Update
PSME_00029885-RA No alias no hits & (original description: no original description) 0.06 Orthogroups_2024-Update
PSME_00035449-RA No alias (at1g79740 : 128.0) hAT transposon superfamily;... 0.04 Orthogroups_2024-Update
Solyc03g063270 No alias No description available 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
InterPro domains Description Start Stop
IPR008906 HATC_C_dom 41 103
No external refs found!