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  5. PSME_00003546-RA

PSME_00003546-RA


Description : (at3g52430 : 231.0) Encodes a lipase-like gene that is important for salicylic acid signaling and function in resistance (R) gene-mediated and basal plant disease resistance. PAD4 can interact directly with EDS1, another disease resistance signaling protein. Expressed at elevated level in response to green peach aphid (GPA) feeding, and modulates the GPA feeding-induced leaf senescence through a mechanism that doesn't require camalexin synthesis and salicylic acid (SA) signaling. Required for the ssi2-dependent heightened resistance to GPA.; PHYTOALEXIN DEFICIENT 4 (PAD4); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: senescence-associated gene 101 (TAIR:AT5G14930.2); Has 722 Blast hits to 622 proteins in 73 species: Archae - 0; Bacteria - 23; Metazoa - 17; Fungi - 11; Plants - 620; Viruses - 1; Other Eukaryotes - 50 (source: NCBI BLink). & (reliability: 462.0) & (original description: no original description)


Gene families : OG_42_0000580 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000580_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00003546-RA
Cluster HCCA clusters: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
72949 No alias alpha/beta-Hydrolases superfamily protein 0.04 Orthogroups_2024-Update
At3g52430 No alias Lipase-like PAD4 [Source:UniProtKB/Swiss-Prot;Acc:Q9S745] 0.03 Orthogroups_2024-Update
Brara.C04416.1 No alias effector-triggered immunity co-regulator *(PAD4) 0.03 Orthogroups_2024-Update
GRMZM2G152739 No alias alpha/beta-Hydrolases superfamily protein 0.04 Orthogroups_2024-Update
Glyma.05G194101 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
MA_101621g0020 No alias (at3g48090 : 244.0) Component of R gene-mediated disease... 0.03 Orthogroups_2024-Update
MA_10385961g0010 No alias (at3g52430 : 139.0) Encodes a lipase-like gene that is... 0.03 Orthogroups_2024-Update
MA_10428089g0010 No alias (at3g52430 : 156.0) Encodes a lipase-like gene that is... 0.03 Orthogroups_2024-Update
MA_10431201g0020 No alias (at3g48080 : 222.0) alpha/beta-Hydrolases superfamily... 0.04 Orthogroups_2024-Update
MA_12775g0010 No alias (at3g48080 : 175.0) alpha/beta-Hydrolases superfamily... 0.04 Orthogroups_2024-Update
MA_168626g0010 No alias (at3g52430 : 224.0) Encodes a lipase-like gene that is... 0.04 Orthogroups_2024-Update
MA_30999g0010 No alias (at3g48090 : 224.0) Component of R gene-mediated disease... 0.05 Orthogroups_2024-Update
MA_34051g0010 No alias (at3g52430 : 140.0) Encodes a lipase-like gene that is... 0.04 Orthogroups_2024-Update
MA_44065g0010 No alias (at3g52430 : 232.0) Encodes a lipase-like gene that is... 0.06 Orthogroups_2024-Update
MA_616336g0010 No alias (at3g48090 : 220.0) Component of R gene-mediated disease... 0.05 Orthogroups_2024-Update
MA_75635g0010 No alias (at3g52430 : 182.0) Encodes a lipase-like gene that is... 0.04 Orthogroups_2024-Update
MA_9535121g0010 No alias (at3g48080 : 132.0) alpha/beta-Hydrolases superfamily... 0.03 Orthogroups_2024-Update
MA_960096g0010 No alias (at3g48090 : 133.0) Component of R gene-mediated disease... 0.05 Orthogroups_2024-Update
PSME_00025242-RA No alias (at3g48090 : 134.0) Component of R gene-mediated disease... 0.03 Orthogroups_2024-Update
PSME_00025243-RA No alias (at3g48080 : 209.0) alpha/beta-Hydrolases superfamily... 0.06 Orthogroups_2024-Update
PSME_00035487-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00046982-RA No alias (at3g52430 : 199.0) Encodes a lipase-like gene that is... 0.04 Orthogroups_2024-Update
Seita.8G065100.1 No alias effector-triggered immunity co-regulator *(PAD4) &... 0.03 Orthogroups_2024-Update
Sobic.005G072200.1 No alias effector-triggered immunity co-regulator *(PAD4) &... 0.04 Orthogroups_2024-Update
Solyc02g032850 No alias Phytoalexin-deficient 4-1 protein (AHRD V3.3 *** Q2TNK3_SOLTU) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002921 Fungal_lipase-like 88 191
No external refs found!