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  5. PSME_00003659-RA

PSME_00003659-RA


Description : (q8l884|lax4_medtr : 816.0) Auxin transporter-like protein 4 (AUX1-like protein 4) (MtLAX4) - Medicago truncatula (Barrel medic) & (at2g38120 : 806.0) Encodes an auxin influx transporter. AUX1 resides at the apical plasma membrane of protophloem cells and at highly dynamic subpopulations of Golgi apparatus and endosomes in all cell types. AUX1 action in the lateral root cap and/or epidermal cells influences lateral root initiation and positioning.; AUXIN RESISTANT 1 (AUX1); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: like AUXIN RESISTANT 1 (TAIR:AT5G01240.1); Has 1256 Blast hits to 1251 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 283; Plants - 825; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 1556.0) & (original description: no original description)


Gene families : OG_42_0000795 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000795_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00003659-RA
Cluster HCCA clusters: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
78094 No alias like AUXIN RESISTANT 1 0.04 Orthogroups_2024-Update
A4A49_27997 No alias auxin transporter-like protein 5 0.04 Orthogroups_2024-Update
A4A49_29007 No alias auxin transporter-like protein 2 0.04 Orthogroups_2024-Update
Brara.C01920.1 No alias auxin transporter *(AUX/LAX) 0.03 Orthogroups_2024-Update
Glyma.06G004500 No alias like AUXIN RESISTANT 2 0.04 Orthogroups_2024-Update
Glyma.11G106000 No alias like AUXIN RESISTANT 2 0.04 Orthogroups_2024-Update
HORVU4Hr1G063650.1 No alias auxin transporter *(AUX/LAX) 0.03 Orthogroups_2024-Update
Potri.005G174000 No alias like AUX1 3 0.02 Orthogroups_2024-Update
Potri.009G132100 No alias like AUXIN RESISTANT 2 0.03 Orthogroups_2024-Update
Pp1s211_67V6 No alias auxin influx carrier component 0.02 Orthogroups_2024-Update
Sobic.001G439000.1 No alias auxin transporter *(AUX/LAX) 0.03 Orthogroups_2024-Update
Solyc09g014380 No alias SlLAX1 0.02 Orthogroups_2024-Update
Solyc10g055260 No alias SlLAX5 0.04 Orthogroups_2024-Update
Solyc11g013310 No alias SlLAX3 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 63 456
No external refs found!